Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02844 ATGGGTACACCAATCTTCCTCATCCTCTTCTGGGTTTTCAGCTTCCAAAGCTCTGTCATTGAGGTGCATTCCCAAGATGCTGGTCTTGACATCCTCTATCCATTTCACATAAAAGGTGAGCAGCCCCTCTATGAAGCCCCTCCTGGTTTTGAGCTGCTTCGCAAAAACAACGTCACCACTATCCACTTTCCATCTTATGGGGATTTGGTTGTCAAGTCCATTTCTTATGACACCAAAAAGATTGATCTTCTTGACCCAAAAAATTGTACCCACCAAGTCTTTCTGAACCTCAATCTCACACTCACACCTTTCCACCACTACTATGTTCTGAAAAACTACACATACCTCAATTGCTCCACTAGCCTTCCACCTCCTTTGATGGAGGTTCCATGTTTAAGTGATTCAAGTTATCATGTTTACACAGTTGACCCTGCACTGCCTGTGCCGGGTTCTTGTAAGGGAATCAAGACCGTCGCTATTCCTTTCAAATATAGTCCTTATCTCTCAGATAACAGTCTTGGTCTTAGATTAACATGGGACTTGCGTGAATCTGAATACAGCAGCAAAGCAGGGAACCATACAAGATATTCCCACACTGCACGCAATACTGTTTTGGGCCTCAGTATCTGTATTTTCGTGATGGCAATACTTATAAGCATAATAAAGGTTGGTATGTCCACGAGTAATTTCCATAAGAAAGAAGGGCAGTTGTTGCAGAGTCTTGCAGATTTCTAG 735 0.4286 MGTPIFLILFWVFSFQSSVIEVHSQDAGLDILYPFHIKGEQPLYEAPPGFELLRKNNVTTIHFPSYGDLVVKSISYDTKKIDLLDPKNCTHQVFLNLNLTLTPFHHYYVLKNYTYLNCSTSLPPPLMEVPCLSDSSYHVYTVDPALPVPGSCKGIKTVAIPFKYSPYLSDNSLGLRLTWDLRESEYSSKAGNHTRYSHTARNTVLGLSICIFVMAILISIIKVGMSTSNFHKKEGQLLQSLADF. 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02844 244 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 6 204 IPR046948 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02844 Seca-Chr9 41994042 41996388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02844 33 198 C3H Transcription Factor Family AT2G25410 30.387 3.96e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02844 - - gmx:100790327 333.569