Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02837 ATGGTGGCCATATGGTATAACAAAATACCTGACAAGACCATTGTTTGGAATGCAAATGCAGAGAATCTAGCACCAACAGGATCACAAATTCAGCTCACATCACAAGGGCTCATGCTGACAAGTCCTGAAGGAGAATCCATTTGGTCAACACAACCAAAAGCTGTTGTTTCCTATGGAGCTATGCTTGACACTGGAAACTTTGTTCTTGTAAACAAGAGTTCTGATTTTGTGTGGGAAAGTTTCAAGAATCCCACTGACACGTTGTTGCCTAACCAATCTCTGCAGCTAGATGGCAACCTAACATCTCAAATCACAAAGACCAATTACACAAGTGGAAGTATTGATGCTCCTGATTCTGCTTCACAATTAGTGTTTGATGAATTAGGGAATATTTATGTAGAAACACCAAATGGGACTAGAATCCAACCTCAGGGTCCAAAATGGAGTAACTTAGTTCTTGATCCTAACGTGTATTACTACAGAGCAACACTTGACTACTATGGAGTTTTCACTCAATATACTCATCCAAGGGACACTAAGGCTCAACAAGGATGGACAATTGTGCGTTATGTTCCTGATAACATTTGCATTGCAATATTCAATGACATGGGTAGTGGTTCATGTGGCTATAATAGTTACTTCTCAATGGAAAATCAGATTCCAACTTGCAAATGCCCTGATGGGTGTTCATTGGTAGATCCAGGTAATGAATTTGGTGGATGCCAACCCAATTTCACCTTCGGTTGTGGAGCTGATAATGATGAAAGATTGCAAGCACGGGCAGAAGATCTATATAAATTAACCACTCTTAGATATGTTGATTGGCCTTTATCAGATTATGAAAAGATGCAACCTTACTCTCAACAGGACTGCCAACAATCTTGCTTGCATGATTGCATGTGTGCTGTTGCCATTTTCAACAATGAAACTTGTTGGAAGAAAAGATTACCTCTTGCTAATGGAAGGGCACAGAGTGGAAGCCAACTGGCCCTTATTAAAACAAGAGTTGCACCTCTAGGTAACAATATTGGTCCTTCCACTTCTCCTGATTCAAAGAAAGAAGATAGAGTTAAGCCAATTCTTCAAGTTTTACTCATTGGCTCCACTGTTATTAATAGTATACTTCTAGCTACTGTAGTTTTGGTTCTTCTCTTAAGGCCCAAAAGAATTGTCCAAGCTGCAAGTCTTTTGGAAACAAATTTACACTCATTTACTTATGAAGCATTGAAAGAGGCCACATGGGGCTTTAGTGAAGAACTAGGCAGGGGTTCATTTGGCATTGTTTACAAAGGCAAGCTAGAAGCAACATTTTATAATGTTGTTGCTGTCAAGAGATTGGACAGATTAGCACAAGAAAGAGAGAAGGAATTTAAGATTGAGTTGAGTGCTATTGGTAAGACCTGCCACAAAAATCTTGTAAGGTTGATTGGATTTTGTGATGAGGGAATCCATAGACTACTAGTCTATGAGTTCATGAGCAATGGCACTCTTGCAGATGCCTTATTTGGACAACCTAAATCCATTTGGAAACTGAGGGTTGGATTTACTTTGGGGATTGCAAGAGGGTTGGTGTACTTACATGAAGAGTGTGACACTCCCATCATACATTGTGATATAAAACCTCAAAATATACTCATAGATGGCCATTTCACAGCAAAGATCTCTGATTTTGGGTTGGCCAAGTTGTTGTTATCTGACCAGAGTAGAACCAATACCATGATCCGAGGAACTCGAGGATATGTGGCTCCTGAATGGTTCAAGAATGTTCCTGTGACTGTTAAAGTGGATGTTTATAGCTTTGGTGTCATGTTATTGGAAATCATTTGTTGCAGAAAAAGTGTGTTGCCAATGGATTCAGGGGAGGAAGAAAAGGCAATATTAACAGATTGGGCCTATGATTGCTATATGGAAGGGAGAATAGATGCTCTAGTGGAGAACGATGAGGAGGCTTTAAGTGACTATGGCAGGTTGCAACAGTGGATAAAGATAGCAATTTGGTGCATTCAGGAGCACCACGAGACGAGGCCAACAATGAGAATGGTCGTGCTAATGCTAGAAGGTTTGGTTGAAGTTCCTAACCCACCATCCCCTTTTTCCATCAATTCATTTTCTTAA 2115 0.4009 MVAIWYNKIPDKTIVWNANAENLAPTGSQIQLTSQGLMLTSPEGESIWSTQPKAVVSYGAMLDTGNFVLVNKSSDFVWESFKNPTDTLLPNQSLQLDGNLTSQITKTNYTSGSIDAPDSASQLVFDELGNIYVETPNGTRIQPQGPKWSNLVLDPNVYYYRATLDYYGVFTQYTHPRDTKAQQGWTIVRYVPDNICIAIFNDMGSGSCGYNSYFSMENQIPTCKCPDGCSLVDPGNEFGGCQPNFTFGCGADNDERLQARAEDLYKLTTLRYVDWPLSDYEKMQPYSQQDCQQSCLHDCMCAVAIFNNETCWKKRLPLANGRAQSGSQLALIKTRVAPLGNNIGPSTSPDSKKEDRVKPILQVLLIGSTVINSILLATVVLVLLLRPKRIVQAASLLETNLHSFTYEALKEATWGFSEELGRGSFGIVYKGKLEATFYNVVAVKRLDRLAQEREKEFKIELSAIGKTCHKNLVRLIGFCDEGIHRLLVYEFMSNGTLADALFGQPKSIWKLRVGFTLGIARGLVYLHEECDTPIIHCDIKPQNILIDGHFTAKISDFGLAKLLLSDQSRTNTMIRGTRGYVAPEWFKNVPVTVKVDVYSFGVMLLEIICCRKSVLPMDSGEEEKAILTDWAYDCYMEGRIDALVENDEEALSDYGRLQQWIKIAIWCIQEHHETRPTMRMVVLMLEGLVEVPNPPSPFSINSFS. 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02837 704 FunFam S-receptor-like serine/threonine-protein kinase 386 491 - -
Seca9g02837 704 ProSiteProfiles Bulb-type lectin domain profile. 1 82 IPR001480 -
Seca9g02837 704 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 697 - -
Seca9g02837 704 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 492 693 - -
Seca9g02837 704 ProSiteProfiles Protein kinase domain profile. 414 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02837 704 Gene3D Transferase(Phosphotransferase) domain 1 492 690 - -
Seca9g02837 704 ProSitePatterns Protein kinases ATP-binding region signature. 420 444 IPR017441 GO:0005524
Seca9g02837 704 Pfam Protein kinase domain 417 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02837 704 SMART serkin_6 414 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02837 704 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 86 IPR036426 -
Seca9g02837 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Seca9g02837 704 Pfam D-mannose binding lectin 13 99 IPR001480 -
Seca9g02837 704 SUPERFAMILY Protein kinase-like (PK-like) 398 686 IPR011009 -
Seca9g02837 704 PIRSF SRK 1 704 IPR024171 GO:0004674
Seca9g02837 704 Gene3D - 3 119 - -
Seca9g02837 704 Gene3D Phosphorylase Kinase; domain 1 382 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02837 Seca-Chr9 41940198 41942396 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02837 349 696 Receptor kinase-like Gene Family AT1G56120 41.176 2.04e-66 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Seca9g02837 Pkinase 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02837 - - lja:Lj2g3v1989170.1 1100.12