Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02835 ATGTCTGTGTGGGCATTTGAAAGACATGCAAATAGTGATCACAGAAAACCCTATGAACATATTTACACCCTACAAACACAGGAAAATCTCCAAGATTGCCTCATTGCTGTGTGGCTTCATTCATCTGAAAGAGAACGCCGTCAAGAATTCTGCTTTTTTCCCAAGGAAAAACAAGAAGATGATCCTTGTTCAATATGTGCAAATGGGGGAGACATATTTCGTTGCGAGCATTGTCCCTCAGCATTCCATGCATCCTGTCTGAATATGGAGAGGGCTCCCCGTCGTGATTGGTCTTGTCCCTACTTCGTTTGTAAGTACTGTAGTCTCAGGGTTTATGGAAAACAAAGGCAACTCATCACATGCTTGCAGTGTGACAAAAATTTTCACTGGCAATGTTTAAAAGAATTCTCCAAAGACCCTGTGGATGTTAGCGGGGACGTGCTGTATTGCAGCCAAAGCTGCAAAGAGCTATATGATGAACTGGAGAGGTCAATTGCAGTCAGTAATGAGTTTGAAAACTACACTTGGTCAATCATCCGTCCTCAGACAACCTTAGCTATGACTAGATATTTTGAATGCAATGCAAAGGTCCCAGTAGCTTTCTCATTAATGAATGAATGTTTTGAGACAATAACTGACAGACACACAGGCATCAATGTGGTTCAAAATGTACTATACAGTTGTAGATCACCAGATTTAACCAGGGTCAATTTTGGGCGTTTTCATATATTAATCCTGGAGGAAGATGATGCAATTGTATGTGCAGCTTCTATAAGGATTCATGGGAGGGAGGTTGCAGAAATGCCTTTTATTGCCACAGAAGGGACACGCAGGAGACAAGGATTTTGCAGGAATTTAATGATTGTAATTGAATCGTTCCTATGTGTCCTTAAAGTGCAGAAGCTGGTCATTCAATCTGTTCCAGATACTTCGGATATGTGCAAGCACAAGTTTGGTTTCAAAGAACTGGCTGGGAACATTGTCATTAGATTTTTAAATAACTTCAGAGTTTAA 1014 0.4063 MSVWAFERHANSDHRKPYEHIYTLQTQENLQDCLIAVWLHSSERERRQEFCFFPKEKQEDDPCSICANGGDIFRCEHCPSAFHASCLNMERAPRRDWSCPYFVCKYCSLRVYGKQRQLITCLQCDKNFHWQCLKEFSKDPVDVSGDVLYCSQSCKELYDELERSIAVSNEFENYTWSIIRPQTTLAMTRYFECNAKVPVAFSLMNECFETITDRHTGINVVQNVLYSCRSPDLTRVNFGRFHILILEEDDAIVCAASIRIHGREVAEMPFIATEGTRRRQGFCRNLMIVIESFLCVLKVQKLVIQSVPDTSDMCKHKFGFKELAGNIVIRFLNNFRV. 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02835 337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 41 112 IPR013083 -
Seca9g02835 337 PANTHER PHD FINGER PROTEIN 12 1 323 IPR042163 GO:0003714|GO:0045892
Seca9g02835 337 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 194 322 IPR016181 -
Seca9g02835 337 SMART PHD_3 104 155 IPR001965 -
Seca9g02835 337 SMART PHD_3 62 103 IPR001965 -
Seca9g02835 337 SUPERFAMILY FYVE/PHD zinc finger 57 108 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02835 Seca-Chr9 41882708 41884546 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02835 1 323 PHD Transcription Factor Family AT4G14920 37.015 1.15e-66 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02835 - - vum:124834316 334.339