Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02827 ATGGGGAGAACCAGACAACAATTAAAAGAGGAAGGAAACAACATGCCCTACACATTAAGGGAACGTAAGTATATAGACTATGCAGAACCTGAATTTAACGACAATGAAAACGTTGAAGACCACGTAGTATCCAGACCCAACATACCAACTAAAAGAAGAAACACAGCATCATCATCATCATTTATTCCACCACCACCAACAACAACAAAGACTGTGATGGTGAACTCAGTTGTTGACAATAATGCAAGAGAGACTGTGATGGTGAACTCAGTTGTTGACAATATTGCAAGAGAAACTGTGTTAGTGAACTCAGTCGTGGATAATATTCCAAGGCATTGCAAGGGTAGGAGGAGTCGCACTGCTAAGAAGACCACTACAACAGAACAAAAGAGGCAAAACAATGAGGTTGGACAAACTTCAACCATTGAAATAGATCCACCTTTACATGAAGGCTCAAGTCAAGGACAAGGTTGCAGTGTGGAAAGAGTTTCATCTATACCTAAAGCAGCAACAAGTTCAAGTAAAAAAACCATCTTGTCTTTGTTAATAGACCGTAAGCACATCCAGGAAGACGAGCAAGTCTTCTATAAGCATGATGATAGAAATGAGGGAAGTGCAGCTGCAACGGGACTGAGAGGAAGAATTACCAGAGGTGGAATTCTCTGCAGCTGTTTCCAGAAAGAAATGTCTGTGTGGGCATTTGAAAGACATGCAAATAGTGATCACAGAAAACCCTATGAACATATTTACACCCTACAAACACAAGAAAATCTCCAAGATTGCCTCATTGCTGTGTGGCTTCATTCATCTGAAAGAGAACGCCGTCAAGAATTCTGCTTTTTTCCCAAGGAAAAACAAGAAGATGATCCTTGTTCAATATGTGCAAATGGGGGAGACATATTCCGTTGCGAGCATTGTCCCTCAGCATTCCATGCATCCTGTCTGAATATGGAGAATTCTCCAAAAGACCCTGTGGATGTTAGCGGGGACGTGCTGTATTGCAGCCAAAGCTGCAAAGAGATATATGATGAACTGGAGAGGTCAATTGCAGTCAGTAATGAGTTTGAAAACTACACTTGGTCAATCATCCGCCCCCAGACAACCTTAGCTATGACTAGATATTTTGAATGCAATGCAAAGGTCCTAGTAGCTTTCTCATTAATGAATGAATGTTTTGAGACAATAACTGACAGACACACAGGCATCAATGTGGTTCAAAATGTACTATACAGTTGTAGATCACCAGATTTAACCAGGGTCAATTTTGGGCGTTTTCATATATTGATCCTGGAGGAAGATGATGCAATTGTATGTGCAGCTTCTATAAGGATTCATGGGAGGGAGGTTGCAGAAATGCCTTTTATTGCCACAGAAGGGACACGCAGGAGACAAGGATTTTGCAGGAATTTAATGATTGTAATTGAATCGTTTCTATGTGTCCTTAAAGTGCAGAAGCTGGTCATTCAATCTGTTCCAGATACTTCGGATATGTGGAAGCACAAGTTTGGTTTCAAAGAACTGGCTGGGAACTTTGAGAAAGAACATGCCTCCTATAACATTTTGACGCTCCCTCATGGTTCAAAACTATACAAAGACTTGGGTGATCTGTTGCACGGCGGCGCGGAGGAGATGCGCGGCCAAAGAAGACGCCTTGTGGGAGACGGCGGTGCGGCCAAAGAAGACACCTCTTGGGAGACGGTGACGCTGCCTGATAAGACGCCTCGTGGGAGACGGTGGCGCGAAGGAGATGCACAGCCTTCACGCAGTGGTGGAGGCGCACATGCGCGCGACGGAGTGAGTGACTGCTGA 1809 0.4362 MGRTRQQLKEEGNNMPYTLRERKYIDYAEPEFNDNENVEDHVVSRPNIPTKRRNTASSSSFIPPPPTTTKTVMVNSVVDNNARETVMVNSVVDNIARETVLVNSVVDNIPRHCKGRRSRTAKKTTTTEQKRQNNEVGQTSTIEIDPPLHEGSSQGQGCSVERVSSIPKAATSSSKKTILSLLIDRKHIQEDEQVFYKHDDRNEGSAAATGLRGRITRGGILCSCFQKEMSVWAFERHANSDHRKPYEHIYTLQTQENLQDCLIAVWLHSSERERRQEFCFFPKEKQEDDPCSICANGGDIFRCEHCPSAFHASCLNMENSPKDPVDVSGDVLYCSQSCKEIYDELERSIAVSNEFENYTWSIIRPQTTLAMTRYFECNAKVLVAFSLMNECFETITDRHTGINVVQNVLYSCRSPDLTRVNFGRFHILILEEDDAIVCAASIRIHGREVAEMPFIATEGTRRRQGFCRNLMIVIESFLCVLKVQKLVIQSVPDTSDMWKHKFGFKELAGNFEKEHASYNILTLPHGSKLYKDLGDLLHGGAEEMRGQRRRLVGDGGAAKEDTSWETVTLPDKTPRGRRWREGDAQPSRSGGGAHARDGVSDC. 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02827 602 Pfam Tify domain binding domain 213 263 IPR032308 -
Seca9g02827 602 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 383 524 IPR000182 GO:0016747
Seca9g02827 602 SUPERFAMILY FYVE/PHD zinc finger 285 322 IPR011011 -
Seca9g02827 602 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 272 372 IPR013083 -
Seca9g02827 602 PANTHER PHD FINGER PROTEIN 12 332 534 IPR042163 GO:0003714|GO:0045892
Seca9g02827 602 MobiDBLite consensus disorder prediction 114 158 - -
Seca9g02827 602 MobiDBLite consensus disorder prediction 130 158 - -
Seca9g02827 602 MobiDBLite consensus disorder prediction 48 68 - -
Seca9g02827 602 MobiDBLite consensus disorder prediction 552 602 - -
Seca9g02827 602 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 423 506 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02827 Seca-Chr9 41773867 41779265 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02827 95 533 PHD Transcription Factor Family AT4G14920 30.695 1.15e-68 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02827 - - aprc:113870228 380.563