Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02817 ATGGTGAACTCAGTTGTTGACAATATTGCAAGAGAAACTGTGATGGTGAACTCAGTTGTTGACAATATTGCAAGAGAAACTGTGTTAGTGAACTCAGTCGTGGATAATATTCCAAGGCATTGCAAGGATCCACCTCTACATGAAGGCTCAAGTCAAGGACAAGGTTGCAGGGTGGAAAGAGTTTCATCTATACCTGAAGCAGCAACAAGTTCAAGTAAAAAAACCATCTTGTCTTTGTTAATAGACCGTAAACACATCCAGGAAGACGAGCAAGTCTGCTATAAGCATGATGATAGAAATGAGGGAAGTGCAGCTGCAACGGGACTGAGAGGAAGAATTACCAGAGGTGGAATTCTCTGCAGCTGTTGCCAGAAAGAAATAGAACGCCGTCAAGAATTCTACTTTTTTCCCAAGGAAAAACAAGAAGATGATCCTTGTTCAATATGTGCAAATGGGGGGAGACATATTCCGTTGCGAGCATTGTCCCTCAGCATTCCATGCATCCTGAATATGGAGAGGGCTCCCCGTCGTGATTGGTCTTGTCCCTACTGCGTTTGTAAGTACTGTAGTCTCAGGGTTTATGGAAAACAAAGGCAACTCATCACATGCTTGCAGTGTGACAAAAATTTTCACTGGCAATGTTTAAAAGAATTCTCCAAAGACCCTGTGGATGTTAGGGGACGTGCTGTATTGCAGCCAAAGCTGCAAAGAGTAAGTAATGAGTTTGAAAACTACACTTGGTCAATCATCCGCCCCCAGACAACCTTAGCTATGACTAGATATTTTGAATGCAATGCAATGGTCCTAGTAGCTTTCTCATTAATGAATGAATGTTTTGAGACAATAACTGACAGACACACAGGCATCAATGTGGTTCAAAATGTACTATACAGTTGTAGATCACCAGATTTAACCAGGGTCAATTTTGGGCGTTTTCATATATTTATCCTGGAGGAAGATGATGCAATTGTATGTGCAGCTTCTATAAGGATTCATGGGAGGGAGGTTGCAGAAATGCCTTTTATTGCCACAGAAGGGACATGCAGGAGACAAGGAATTTGCAGGAATTTAATGATTGTAATTGAATCGAAGCTGGTCATTCAATCTGTTCCAGATACTTCCGATATGTGGAAGCACAGCTTTGGTTTTAAAGAACTGGCCGCTGGGAAGTTAGAGAAAGAACTTGCCTCCTATAACATTCTGACGCTCCCTCATGCTTCAAAACTGTACAAAGACTTGGGTTGTAATCCAAACTAA 1257 0.4169 MVNSVVDNIARETVMVNSVVDNIARETVLVNSVVDNIPRHCKDPPLHEGSSQGQGCRVERVSSIPEAATSSSKKTILSLLIDRKHIQEDEQVCYKHDDRNEGSAAATGLRGRITRGGILCSCCQKEIERRQEFYFFPKEKQEDDPCSICANGGRHIPLRALSLSIPCILNMERAPRRDWSCPYCVCKYCSLRVYGKQRQLITCLQCDKNFHWQCLKEFSKDPVDVRGRAVLQPKLQRVSNEFENYTWSIIRPQTTLAMTRYFECNAMVLVAFSLMNECFETITDRHTGINVVQNVLYSCRSPDLTRVNFGRFHIFILEEDDAIVCAASIRIHGREVAEMPFIATEGTCRRQGICRNLMIVIESKLVIQSVPDTSDMWKHSFGFKELAAGKLEKELASYNILTLPHASKLYKDLGCNPN. 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02817 418 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 290 363 IPR016181 -
Seca9g02817 418 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 270 404 IPR000182 GO:0016747
Seca9g02817 418 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 115 226 IPR013083 -
Seca9g02817 418 PANTHER PHD FINGER PROTEIN 12 62 413 IPR042163 GO:0003714|GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02817 Seca-Chr9 41583113 41585404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02817 70 413 PHD Transcription Factor Family AT4G14920 32.775 2.37e-52 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02817 - - vum:124834316 278.485