Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02810 ATGACCAGCTTCTGCACTTTAAGGGCACATAGAACTGGAAAAAAAAGGATGGCTTTACAAATTGAACATATTTCTGTTTTTGCAAAATTAAATATCCTCATATTCAGGTGTTGGAGATTATTCATGATCAAACTTTGGAATCATGGTCTTCTTGATGCCTGCACAATGAACAACTGTAATATAGTATTAGGTAGTTACAGAAACGAGGGATTGGATACTGGCAAAAATTTAGACCAAAAGGAAACTGACTAA 252 0.3452 MTSFCTLRAHRTGKKRMALQIEHISVFAKLNILIFRCWRLFMIKLWNHGLLDACTMNNCNIVLGSYRNEGLDTGKNLDQKETD. 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02810 83 PANTHER POLYCOMB GROUP PROTEIN 34 69 - -
Seca9g02810 83 Pfam VEFS-Box of polycomb protein 34 60 IPR019135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02810 Seca-Chr9 41506318 41507132 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02810 37 63 C2H2 Transcription Factor Family AT5G51230 81.481 2.60e-12 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02810 - - gmx:100807112 82.8037