Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02798 ATGATTGGGATTTGGGGAATGGGAGGGATGGGGAAGACAACCCCTGCCGCTGCTATTTTTCACAAGGTCTCTTCCCAATATGATGGCAGTCGCTTCTTAGAAAATGTGACAAAAGAATCAAAAAGGCATGGACTCAATTACATATTTAGTAAACTTCTTTCTATGTTACTAATGGAAGATCTCTGTGTTGTTACCCTCAAAGTAATATCCTCTAATGTTATAAGAAGACTCAGACATATGAAAGCGTTCACGCCTATCAGTCGAAGGAAAAACGCTGACAATGGAGAAGCTCAAGTTCCTCACCGTTCAGTCGTTCACGAACACAGGGACTGCTTTGCCTCTATTAATTCTGGGTTGACTTATTTGAATCAGGGTTCAAATAAGAAAACACAATTTTAA 399 0.3985 MIGIWGMGGMGKTTPAAAIFHKVSSQYDGSRFLENVTKESKRHGLNYIFSKLLSMLLMEDLCVVTLKVISSNVIRRLRHMKAFTPISRRKNADNGEAQVPHRSVVHEHRDCFASINSGLTYLNQGSNKKTQF. 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02798 132 Pfam NB-ARC domain 2 47 IPR002182 GO:0043531
Seca9g02798 132 Gene3D - 1 109 IPR027417 -
Seca9g02798 132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 71 IPR027417 -
Seca9g02798 132 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 81 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02798 Seca-Chr9 41426431 41426829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02798 2 45 WRKY Transcription Factor Family AT5G45050 45.455 9.47e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02798 - - mtr:25502326 112.849