Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02781 ATGAATCCACAGAACCTGACACCTATGAATTTACTCTCTCAGCAAGTTGCTTATCATCCTCGTCTCTTTGTAGAAGAGATTTCAAACTTGGGAAATTCTAGTGTAATGAAGCCTGTGACCATGGAGCCTAAAGGTTCACAGATGACAATCTTTTATGCTGGGCAAGTTATGGTCTTTGATGATTTGCCAGCTGACAGAGCCAAGGAGATCATGTCCTTTGCCAGCAAAAAAACCTTTGAAAACCAGAACAACAACTATGCTTCTACATTCCCTCAGAGACACCCTTCATTTCCTGCCAGAAGTTCTCCTAGTTTCATCACTAGGCCATTCCCTTTTCATGTGAATATCATCCCTACCACTCCCAACAATTCTGTTCAAGAGCACCCTCAACCATCATCCACACCTGTTGTTTATGATCTACCAATGACTAGGAAAGCTTCACTTCATCGGTTCTTAGAGAAAAGGAAGGATAGAATTGCTTCCAGATCACCATATCAAACAAGCAATCCCATGGCAGCCTTTAGTAAGCAAGCTGATGAATCTATGTCATGGCTCGGCTTGGCACAACAAGACAAATCTGAGAGTAGCTCCAGCTCTGTGTTATTTTAA 609 0.422 MNPQNLTPMNLLSQQVAYHPRLFVEEISNLGNSSVMKPVTMEPKGSQMTIFYAGQVMVFDDLPADRAKEIMSFASKKTFENQNNNYASTFPQRHPSFPARSSPSFITRPFPFHVNIIPTTPNNSVQEHPQPSSTPVVYDLPMTRKASLHRFLEKRKDRIASRSPYQTSNPMAAFSKQADESMSWLGLAQQDKSESSSSSVLF. 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02781 202 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 32 174 IPR040390 -
Seca9g02781 202 SMART tify_2 41 76 IPR010399 -
Seca9g02781 202 Pfam Jas motif 141 166 IPR018467 -
Seca9g02781 202 Pfam tify domain 42 75 IPR010399 -
Seca9g02781 202 ProSiteProfiles Tify domain profile. 41 76 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02781 Seca-Chr9 41294250 41295669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02781 4 190 Tify Gene Family AT1G19180 37.696 2.39e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Seca9g02781 tify 2.5e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02781 K13464 - gmx:100306332 219.55