Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02773 ATGCAGACTAAGAGAACGAAGAAGGCAGGCATTGTCGGAAAATATGGTACAAGATATGGTGCAAGTCTGCGGAAGCAGATTAAGAAGATGGAAGTTAGTCAGCATAGCAAATTTTTCTGTGAGTTCTGTGGAAAGTATGCTGTGAAAAGGAAGGCTGTAGGAATATGGGGATGCAAGGATTGTGGGAAAGTAAAAGCAGGAGGTGCCTACACTTTGAATACTGCTAGTGCTGTGACTGTGCGGAGCACCATCCGGAGGTTGAGGGAACAAACAGAGAGTTGA 282 0.4504 MQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES. 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02773 93 FunFam 60S ribosomal protein L37a 3 93 - -
Seca9g02773 93 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 5 73 IPR002674 GO:0003735|GO:0005840|GO:0006412
Seca9g02773 93 PANTHER ZGC:171772 2 93 - -
Seca9g02773 93 Pfam Ribosomal L37ae protein family 5 89 IPR002674 GO:0003735|GO:0005840|GO:0006412
Seca9g02773 93 NCBIfam ribosomal protein eL43 4 92 IPR002674 GO:0003735|GO:0005840|GO:0006412
Seca9g02773 93 SUPERFAMILY Zn-binding ribosomal proteins 11 83 IPR011332 GO:0006412
Seca9g02773 93 Gene3D - 2 93 IPR011331 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02773 Seca-Chr9 41251883 41253343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02773 3 93 Cytoplasmic Ribosomal Protein Gene Family AT3G10950 93.407 6.01e-59 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02773 K02921 - aew:130783461 190.274