Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02767 ATGATGGAACCTACTGAAACTGACAAAACTTTTGAGGGTGATCCCAAAAATTCTAAATCCCCCAATAAAGATAATTTGGATTCTGATAAGGATCCTGAAGTTTGGAAAAGGATAAGTGAACTAACAGATGAGGATATCAGAGGGCTTGAGTTTGATACTGAAGAGGATGCATATGATTTCTACCGTGAGTATGCTAAATTCATAGGATTTTCTGTAAGGAAAGGTGATGTGTATAGAAATTGTAATGGTACAATTACAATGAGGCAATTGGTTTGTAATAGAGAGGGAGAGAGAAGTGAGAAGCATCTTAATAGGACTGATAGAATTAGGGAGGCAAAGGCCCTCACCCGAACTGAGTGTAAAGCAAGGCTCCGTGTTTCCTTAGATTATAGAAGTAGAAAGTGGAGGGTTGGAATCTTTGAGCTAGCTCATAACCATGAATTGACTCCTGCAAGTATGATACATTTGCTACCTGCTTATCGTGGGTTGAGTGTAGCGGATAAGGCACAAGTTGACGGTCTACATCATTACGGTGTCAGGACTTGTCATATAATGGGTCTTATAATGGGTCAAAAGGGAGGTTATTCTGATCTTGGTTTTTGTAAGAAGGATTTGTACAATCATATTGATAAGGAGAATCGGGCAAAAATAGAGGATGGGGATGCATTTGCTGCGTTATGCTACCTTCAATCTAAGTTTGACAACAATCTGATGACATTTGTAAAGTTTACAACCACTGAAGATCACAAACTTGAAAACCTGTTTTGGTCAGATGTAGGAAGTAGAATTGATTATATTTGTTTTGGTGATGTAGTTGCTTTTGACACAACGTACAAGAAAAACAAGTATAACAGGCCATTAGTAATTTTTTCTGGTTATAACCATCATGGTGAAACCACTATTTTTGGTTGTGCTCTTGTTGGTGATGAGAAGATTGAAACCTATAAATGGGTGTTGGAATCATTTCTTGATCTAATGTCCAATAAAGTTCCTAAGGTTGTGGTTACTGATGGAGATGGTGCAATGCGTGAAGCTATCAGGTCTGTTTTTCCAGGTGCTCTTCACAGGTTGTGTGCATGGCACCTTCACCAAAATGCTTGTGAGAATGTTAAGAATCCCAAATTCCTTGAAGATTTTAAGACCCTAATTTATGGAAATTTTAGTCGTCAGAAATTTAAGGATGAGTGGAACAATGTTGTTGACAAACATGGTGTGAGGGAAAATAGGTGGGTCAGAAAAGTATATGACATGAAGAGGATGTGGGCCACGGCATATCTGAGGGATAATTTTTTTGGGGGTATCAGGACAACTTCTATATGTGAAGGGATTAACTCATTCATTAAGAGGTATGTTCAGAGCAAAAATAGCCTTGTTGATTTTCTTCACAATTTTGAGAGAGCTGTGAATGAATATAGACACAACGAGTTAACTTCAGATTTCAAGTCGAAATACACTCAACCTGTGATGACTACTGCTTTGGAAAGATATGAAGTTCAAGCTTCAAATGTCTACACGAGGAATAAGTTTTTTGATGTTCGAAAGCAAATTGAGAAAGTTTCTGCCATAAATGTCATTGAGAGGACAAATGTTGGTAATGTCATTACAATGCAGATGAATAAATTTGGCACTCCTGATTCTTCTTACATTGTTACGTTGGATAAGTCTGATGGTAATTTCGTTTGTGATTGTCGCATGTTTGAATCATGTGGTCTCCCTTGTTCACACATTTTCAGTGCTATGAAGCATGAGCAAGTGGAATCCATTCCTTCATCTTTGATTTTGAAAAGATGGACTAAGTTGGCTAAAGTTCAGCACATTTCTTCTGTTTATGCTGAAGAAGGTGACACATCAAAGAAAGATTTATTGAGGTCAGGTGCTGTTGGTGCTGCATGTAACAGGCTTAACAAGGCTGCACGTAGAAATCCTCACAATTTTGTAAAGAACATTGAATCTATTCATAAGTTGGCAGAACAGATGGAAAGGCGGGAAGGTATTGACTTGGATGTTGCTGATATATCAAGAGCTGTCCGTGATCCAACTGTTGTTAAAACTAAAGGTGCCCCTCGAAAGAATAAGAAAATGACCAAAAAAAGGAAATGTTCTTACTGTAAATGTCCAGGGCACACAGTTAGGACATGCACTAAATATGCTACTCGTGATCAGTTGGATACAGTTATTGAAGAGGAATCATCTGTTGAGACTGATGAAGATTCAAGAGATGAAAGTAGGTCACGGGATGTTCACATTTCTAACCATTTGAATGATGTAACAGTCTCTGCTGGTCAGAATTGTGCTTCAGACAAGGGTCAGTCTAAGAAGAGAAGGAGAAATAGTGAAGGTTTGAAAATGACCCAAGAATCTGTTAATGAAAGGAGGTCCAGTGATGTGAACAAATGTCAACAGAATGATACTGGTGTTGCATTCAGCAGAATAAATACCCCCTCCTTATTTGGTAATCATGTGTACTATTCAAACATGAATGGTCCGAGTATTTCAAGACCTGTGCATATTAGACCTTCCATGATTCATGGATTTGGGCAAGGATTTGTTGGTAATATAGTTGAGGACATGCTACAGTATCCCCAAATGTATATGCAGCAATCTATGTATACACCTCCAGTAGTTCATAACTTTGACCAATATGGTAATAGCTTTCAGTTTCCTAATTCTATGAACAACGTTGAAAGGAATAATGGTGCAAGAAGCAAGGGTTTTGGAAAAAAATGA 2727 0.3799 MMEPTETDKTFEGDPKNSKSPNKDNLDSDKDPEVWKRISELTDEDIRGLEFDTEEDAYDFYREYAKFIGFSVRKGDVYRNCNGTITMRQLVCNREGERSEKHLNRTDRIREAKALTRTECKARLRVSLDYRSRKWRVGIFELAHNHELTPASMIHLLPAYRGLSVADKAQVDGLHHYGVRTCHIMGLIMGQKGGYSDLGFCKKDLYNHIDKENRAKIEDGDAFAALCYLQSKFDNNLMTFVKFTTTEDHKLENLFWSDVGSRIDYICFGDVVAFDTTYKKNKYNRPLVIFSGYNHHGETTIFGCALVGDEKIETYKWVLESFLDLMSNKVPKVVVTDGDGAMREAIRSVFPGALHRLCAWHLHQNACENVKNPKFLEDFKTLIYGNFSRQKFKDEWNNVVDKHGVRENRWVRKVYDMKRMWATAYLRDNFFGGIRTTSICEGINSFIKRYVQSKNSLVDFLHNFERAVNEYRHNELTSDFKSKYTQPVMTTALERYEVQASNVYTRNKFFDVRKQIEKVSAINVIERTNVGNVITMQMNKFGTPDSSYIVTLDKSDGNFVCDCRMFESCGLPCSHIFSAMKHEQVESIPSSLILKRWTKLAKVQHISSVYAEEGDTSKKDLLRSGAVGAACNRLNKAARRNPHNFVKNIESIHKLAEQMERREGIDLDVADISRAVRDPTVVKTKGAPRKNKKMTKKRKCSYCKCPGHTVRTCTKYATRDQLDTVIEEESSVETDEDSRDESRSRDVHISNHLNDVTVSAGQNCASDKGQSKKRRRNSEGLKMTQESVNERRSSDVNKCQQNDTGVAFSRINTPSLFGNHVYYSNMNGPSISRPVHIRPSMIHGFGQGFVGNIVEDMLQYPQMYMQQSMYTPPVVHNFDQYGNSFQFPNSMNNVERNNGARSKGFGKK. 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02767 908 MobiDBLite consensus disorder prediction 724 800 - -
Seca9g02767 908 MobiDBLite consensus disorder prediction 1 31 - -
Seca9g02767 908 MobiDBLite consensus disorder prediction 768 797 - -
Seca9g02767 908 Pfam FAR1 DNA-binding domain 59 149 IPR004330 -
Seca9g02767 908 ProSiteProfiles Zinc finger SWIM-type profile. 548 584 IPR007527 GO:0008270
Seca9g02767 908 MobiDBLite consensus disorder prediction 751 767 - -
Seca9g02767 908 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 43 647 IPR031052 GO:0006355
Seca9g02767 908 SMART 26again6 559 586 IPR006564 GO:0008270
Seca9g02767 908 Pfam MULE transposase domain 271 365 IPR018289 -
Seca9g02767 908 MobiDBLite consensus disorder prediction 889 908 - -
Seca9g02767 908 MobiDBLite consensus disorder prediction 736 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02767 Seca-Chr9 41154550 41157680 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g02767 MULE 3.5e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02767 - - tpra:123910662 773.852