Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02724 ATGGCTACAGAGATTGGCCTTGTGTCCATGAGCCAGATCCAAAAATTACCACAATCCCAACACCACCAAAATCAACCCCAAACAAACCCTAACTCCTCCACCACTACCACTACCACTGCTGTCTCCTCCTCCTCACCGACTTGGATGTGGAACCCTAGGGAGCAGCAGCAGCAGCCAGAGGAAGAAGAGGAAGAGTCATGGGAGGTGAGAGCTTTTGCAGAAGACACAAGGAACATAATGGGAACAACATGGCCTCCAAGGTCCTACACCTGCACCTTCTGCAGAAGGGAGTTCAGGTCAGCCCAAGCTCTCGGTGGTCACATGAACGTTCACCGCCGTGACCGTGCTCGCCTCCACCAACCTCACCCTCACCCTCCCACTGCTTCATTCATAAATATCCCATCTCAAGAGCTTGTTGCAAATGCAGGATTGTGCCTCCTCTATCATTTACCCAGCCCTAATGCTTCTTCTTCTGCCTTCACTAGTCCTACCTTGAACAATGCAAATGGAGAATCTCCCTCCACTCTTCTCTCCATTTCATCCTCCTATTCACCAAACAACTTGATGATGCAATCCTTTAGTTTGCAAGCTGCAGCACCACCAGTTTCTTCTTACTTTACCAAAGTGGAACAACCACAACCCACAACCTCTACCTCCATAAATAATAATGGACACCTTGAAGAGCTTGATCTAGAACTCCGCCTCGGCCACAAGCCTACACTAAATAGTACCTAG 735 0.4898 MATEIGLVSMSQIQKLPQSQHHQNQPQTNPNSSTTTTTTAVSSSSPTWMWNPREQQQQPEEEEEESWEVRAFAEDTRNIMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQPHPHPPTASFINIPSQELVANAGLCLLYHLPSPNASSSAFTSPTLNNANGESPSTLLSISSSYSPNNLMMQSFSLQAAAPPVSSYFTKVEQPQPTTSTSINNNGHLEELDLELRLGHKPTLNST. 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02724 244 PANTHER OS07G0101800 PROTEIN 61 239 - -
Seca9g02724 244 MobiDBLite consensus disorder prediction 1 68 - -
Seca9g02724 244 SMART c2h2final6 89 111 IPR013087 -
Seca9g02724 244 Pfam C2H2-type zinc finger 89 113 - -
Seca9g02724 244 MobiDBLite consensus disorder prediction 1 55 - -
Seca9g02724 244 SUPERFAMILY beta-beta-alpha zinc fingers 86 116 IPR036236 -
Seca9g02724 244 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 116 IPR013087 -
Seca9g02724 244 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02724 Seca-Chr9 40592027 40592761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02724 48 239 C2H2 Transcription Factor Family AT4G17810 43.077 6.93e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Seca9g02724 zf-C2H2_6 5.1e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02724 - - gmx:100818142 250.751