Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02717 ATGGTATCAACAGAGGAGTCATGGACAAGTTGGTTGTGTGATTTGGAAGCAGAGGATTACAATTTCATCAATCAATCCGACACAGGAGGAAGTTTCCCTGCGCCACAAGAACAGAACTTGCAACGATCTTTCTCTACCGATAGCTACCGCTCTTACGCCACTTCCACTACTTCCACCTTCAAAACCGAAAACTCCAGCACCATGAGCAATTCCTCCTCAGGGGATGTTAACAGCTTCCAGAGGGAGAGGCCTTCCAAGACACTCAAGACCGGCCCTTCAAATTCTCCTAACACTGGCAGCTACATTCTCTCGTTTAACAATGAGAATCCAGCACCAGCACCAATATTGAGCATGGATTCGACCTTAAAGCCAAAAGGGAAGGTTGTGAATCATGGGAGGTCTCTGCCCTCAAAGGAAAATCTAAAGAAGGAACCTAGTAATGTTCAAGAGGGCGAGAAGACCAGATCTCCTCACCATGCTCTAGATCACATTATTGCTGAGAGAAAGAGGAGACAAAAGATTAGCCAGCAGTTCATAGCTCTTTCAGCCCTTATTCCAGGCCTCAAAAAGCACATGAAAGAGCTCCAAGAGCAAGTGAAGGTACTGGAAGAGCAGGCCAAAAGGAAAAGCGGTGATTCGGTGGTATATGTTGAGAAATCCAAGTCCTCTGTAGACGAAGATGTCTCACTCTCAGACACCTCATCAAATTCTGGCAACGGGAACTCCTATGACGACCCCTCAAAAACAAATCGATCACTGCCAGAAGTTGAAGCAAGGGTGTCGGATAAAAACGTCCTCATCCGAATCCACTGTGACAAACACAAGGGAGTGTTGATGAACATATTCAAAGAGATACAGAACCTTCATCTATCAGTGATCAATAGCAGTGCCTTGCTTTTCGGGACCTCCAAACTCGACATAACCATCATAGCAGAGATGGAGGATGAATTCAACTTCAACGTGAAGGAGGTGGCTGGAAATCTTCGAGCTGGACTCCTGCAATTCATGTAG 1011 0.459 MVSTEESWTSWLCDLEAEDYNFINQSDTGGSFPAPQEQNLQRSFSTDSYRSYATSTTSTFKTENSSTMSNSSSGDVNSFQRERPSKTLKTGPSNSPNTGSYILSFNNENPAPAPILSMDSTLKPKGKVVNHGRSLPSKENLKKEPSNVQEGEKTRSPHHALDHIIAERKRRQKISQQFIALSALIPGLKKHMKELQEQVKVLEEQAKRKSGDSVVYVEKSKSSVDEDVSLSDTSSNSGNGNSYDDPSKTNRSLPEVEARVSDKNVLIRIHCDKHKGVLMNIFKEIQNLHLSVINSSALLFGTSKLDITIIAEMEDEFNFNVKEVAGNLRAGLLQFM. 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02717 336 Coils Coil 185 212 - -
Seca9g02717 336 MobiDBLite consensus disorder prediction 26 114 - -
Seca9g02717 336 MobiDBLite consensus disorder prediction 227 249 - -
Seca9g02717 336 MobiDBLite consensus disorder prediction 26 159 - -
Seca9g02717 336 MobiDBLite consensus disorder prediction 226 255 - -
Seca9g02717 336 MobiDBLite consensus disorder prediction 136 159 - -
Seca9g02717 336 Gene3D - 148 214 IPR036638 GO:0046983
Seca9g02717 336 PANTHER BHLH TRANSCRIPTION FACTOR 35 335 - -
Seca9g02717 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 153 206 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02717 Seca-Chr9 40518685 40521041 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02717 154 336 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 44.615 1.55e-42 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02717 - - tpra:123911002 318.546