Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02713 ATGTTTTCTTGTCCCGCTTCTTACTCACTAACGAGTAAAAGCACTAGGAAGTGTGACACATCCGTTACAAACACCCTCAAAGATCAGTATTTGAGGAGCATTCCCATCCTCACCATGCGATCACCAGCAAAATTATTCAAGATGTCACAGCTCATTTTCAACAATCCCTTACCCTTTCTACTATTATGTTTGTTGTGCATAAGTCGAAGTAGCTTAGCGTCCATCTCGAGAGACTTTCAAATTTTGTTGCAAGTGAAGGACACCCAAATTCAAGATAAGAGCAATAGCCTAAAAGACTGGGTGCCAAACACACACCACAACCCTTGCAACTGGACTGGCATTACCTGCGATGCACGAAACAAATCAGTTGTCTCCATTGACCTCTCTGAGACTGGGATTTATGGCGAATTTCCCTATGGTTTTTGTCACATTCAGACCCTCAAAAACCTTTCTCTTTCAGGGAATTTTCTGGGCAATTCCATCTCCTCCCAGTCTTTGATTCCCTGTTGCCGACTTCGTCTCTTGGACATTTCCGACAATTTATTCATCGGAAGCTTGCCAGAATTCACACCAGAGTTTTCTGAGCTAAGAATACTGGACCTCTCACGGAACAACTTCACCGGAGATATTCCTACAAGTTTTGGTTGGTTTCCACAATTGAGGGTGCTCGTTTTGTCTGGAAACCTTCTCACCGGAACGATCCCTCCCTTTTTTGGCAACCTCAGTGAGTTAATTCGATTGGAAATAGTTAATAATCCCCTAAAACCAGGACCTTTACCTTCTCAAATTGGGAACCTTTCTAAGCTGGAAATTTTGTACCTTAGCACAATAAACCTCGTAGGGGACATACCAGAGTCCATTGGGAACCTAGTCTCGCTCAATAACTTGGATTTGACTCATAACTCTTTATCAGGCAACATCCCAAATAGCATTTCAGGCTTGAAAAGTGTGGTGAAGATTGAGCTGTACGACAACCAGCTTTCTGGTGAATTACCCCAAGGTTTAGCAAACCTCAGCAATTTGGTTATCTTGGACCTCTCTCAGAACACCCTCACAGGAAAATTGCCGGACACGATCGCTTCATTGCATCTTTCTTCTCTCAACTTGAACGACAACCTTCTCGAGGGACTAGTCCCTGAAAGTTTAGCTTCAAACCCGAATTTGCATCAACTGAAACTCTTCAACAACAGCTTCACTGGGAAACTGCCGCAAGGTTTGGGGCAAAACACTGCGTTAGTGGATTTTGATGTCTCAACCAATAACTTCACTGGTGAGTTGCCTAAATACCTTTGCGAAAGGAACACGCTTCAGCGTCTCATCACATTCAATAATCACTTTTCTGGAGCTTTACCTGATCAATTAGGCGAATGCCATTCCCTCAACTACGTCAGAATCGAGAACAATCAACACTCTGGCTTGGTGCCACCCAAATTCTGGAGCCTTTCACAGCTTCAGTTTTTGCAAATGGAGAACAACATGTTCGAAGGTTCCCTCTCTGATTCCATTTCCCATGCCCGAGGAATCACCAAACTACTTTTATCCAGTAACAAATTTTCCGGCCAGTTCCCAGCGGGAATTTGTGAGCTTGATCAACTCGTTCAGATTGACGTCAGCAAAAATCGATTTACTGGTGAAGTTCCAGCCTGTATAACCCGATTAAGGAAATTACTGAAGCTTGAGATGCAGGAGAACATGTTCACCGGCGAGATTCCTGGTAATGTGAGTAATTGGACTTATTTGATCGAGTTGAACTTGTCGCATAACCGATTCTCCGGCTCAATCCCACCAAAACTTGGTAATTTGCCGGATTTAATATACCTTGATCTCGCTTCTAATTCACTGACTGGGAAGATTCCGGTGGAGTTGACGAGTCTGACGCTCAACCAGTTCAACGTCTCTAACAACAAATTGTACGGGGAGGTTCCTTCAGGTTTCAACCATGAAGTGTACTTGTCGGGTCTAATAGGAAATCCGGGTTTGTGTAGCCCAGTTATGAAAACCTTGCGTCCTTGTTCAAGGCACAAACCCTTTTCTTTGGTTGTTATAATCATTTTAGTTGCTTGTGCTGTGCTCCTTCTAGGGTCCCTGTTGTTGTTCTTCATGAATAGAAAACCAACTATTCTTGGTGGCAAATCCAAGGGCTCTTTCATGACAACAATGTTTCAAAGAGTGGGGTTTAATGGGGAGGACATACTCCCATTTTTAACTAGCGAGAACATGATTGGAAGGGGGAGTTCTGGTCAGGTGTACAGGGTTAGGTTCAAGACAGGGCAGACAGTGGCAGTGAAAAAGCTCTGGGGTGGTACACAAACACCAGATACAGAGTCAGTGTTCAGGTCAGAGATTGAGACATTGGGGAGAATTAGGCATGTTAATATTGTGAAATTGTTGTTTACTTGTAGTGCTGATGACTTCAGATTATTGGTGTATGAGTACATGCAAAATGGGAGCTTAGGTGATGTGTTGCATCATGTAGACAAGTGTGAGAAGTTAATGGATTGGTCCAGGCGGTTCAAAATTGCTTTGGGAGTGGCTCAGGGGTTGGCTTATTTACATCATGATTGTGTGCCAGCTATTATTCACAGGGATGTTAAGAGCAATAACATATTGCTTGACCATGAGTTTGTTCCTCGTGTAGCAGATTTTGGATTGGCTAAGACATTGCAGCGTGAGGCCAGCAAGGATGTTATGTCCAGGATTGCTGGATCATATGGCTACATTGCTCCAGAGTATGCTTATACATTGAAAGTGACTGAGAAGAGCGATGTCTATAGTTTTGGCGTGGTGCTTATGGAATTGATCACTGGCAAGAGGCCAAATGACTTTTCCTTTGGTGAGAACGAAGATATAGTGAAGTGGATCACTAAGACTGCTTTATCTCCATCTCCTGAAGGAAGAGGTAGCAATTTTGGAGGAGGTCATGACTGTGTTCTGACCCAGATTATGGACCCAAGGTTGGACCCAACTACTTGTGATTATAAAGAGATTGGGAAGGTTTTAAATGTAGCTTTACTTTGCACCTCAATGTTTCCCATTAATAGGCCCTCAATGAGAAGGGTGGTTGAATTGCTCAAGGACCATAAACCGAAAATGAGAGAGTGCATTTCTATCCACATTGGTCAGGCTGGTATTCAGGTTGGAAATGCTTGCTGGGAGGGGAGCTTTATTGCCTCCCGCATGGCATTCAGCCTGATGGCCAGATGCTTGGTGGAGGTGACGATACAGTTTTTATAG 3234 0.4363 MFSCPASYSLTSKSTRKCDTSVTNTLKDQYLRSIPILTMRSPAKLFKMSQLIFNNPLPFLLLCLLCISRSSLASISRDFQILLQVKDTQIQDKSNSLKDWVPNTHHNPCNWTGITCDARNKSVVSIDLSETGIYGEFPYGFCHIQTLKNLSLSGNFLGNSISSQSLIPCCRLRLLDISDNLFIGSLPEFTPEFSELRILDLSRNNFTGDIPTSFGWFPQLRVLVLSGNLLTGTIPPFFGNLSELIRLEIVNNPLKPGPLPSQIGNLSKLEILYLSTINLVGDIPESIGNLVSLNNLDLTHNSLSGNIPNSISGLKSVVKIELYDNQLSGELPQGLANLSNLVILDLSQNTLTGKLPDTIASLHLSSLNLNDNLLEGLVPESLASNPNLHQLKLFNNSFTGKLPQGLGQNTALVDFDVSTNNFTGELPKYLCERNTLQRLITFNNHFSGALPDQLGECHSLNYVRIENNQHSGLVPPKFWSLSQLQFLQMENNMFEGSLSDSISHARGITKLLLSSNKFSGQFPAGICELDQLVQIDVSKNRFTGEVPACITRLRKLLKLEMQENMFTGEIPGNVSNWTYLIELNLSHNRFSGSIPPKLGNLPDLIYLDLASNSLTGKIPVELTSLTLNQFNVSNNKLYGEVPSGFNHEVYLSGLIGNPGLCSPVMKTLRPCSRHKPFSLVVIIILVACAVLLLGSLLLFFMNRKPTILGGKSKGSFMTTMFQRVGFNGEDILPFLTSENMIGRGSSGQVYRVRFKTGQTVAVKKLWGGTQTPDTESVFRSEIETLGRIRHVNIVKLLFTCSADDFRLLVYEYMQNGSLGDVLHHVDKCEKLMDWSRRFKIALGVAQGLAYLHHDCVPAIIHRDVKSNNILLDHEFVPRVADFGLAKTLQREASKDVMSRIAGSYGYIAPEYAYTLKVTEKSDVYSFGVVLMELITGKRPNDFSFGENEDIVKWITKTALSPSPEGRGSNFGGGHDCVLTQIMDPRLDPTTCDYKEIGKVLNVALLCTSMFPINRPSMRRVVELLKDHKPKMRECISIHIGQAGIQVGNACWEGSFIASRMAFSLMARCLVEVTIQFL. 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02713 1077 FunFam Leucine-rich repeat receptor-like protein kinase TDR 359 673 - -
Seca9g02713 1077 Pfam Leucine rich repeat N-terminal domain 77 117 IPR013210 -
Seca9g02713 1077 FunFam Leucine-rich repeat receptor-like protein kinase 75 236 - -
Seca9g02713 1077 ProSitePatterns Serine/Threonine protein kinases active-site signature. 859 871 IPR008271 GO:0004672|GO:0006468
Seca9g02713 1077 FunFam Leucine-rich receptor-like protein kinase family protein 259 357 - -
Seca9g02713 1077 Pfam Leucine rich repeat 195 254 IPR001611 GO:0005515
Seca9g02713 1077 Gene3D Tubulin/FtsZ, GTPase domain 1036 1066 IPR036525 -
Seca9g02713 1077 Pfam Protein kinase domain 737 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02713 1077 Gene3D Ribonuclease Inhibitor 344 672 IPR032675 -
Seca9g02713 1077 Gene3D Ribonuclease Inhibitor 75 233 IPR032675 -
Seca9g02713 1077 Gene3D Ribonuclease Inhibitor 234 334 IPR032675 -
Seca9g02713 1077 SMART serkin_6 735 1030 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02713 1077 SUPERFAMILY RNI-like 118 432 - -
Seca9g02713 1077 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 286 1025 - -
Seca9g02713 1077 SUPERFAMILY Protein kinase-like (PK-like) 735 1024 IPR011009 -
Seca9g02713 1077 ProSiteProfiles Protein kinase domain profile. 735 1031 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02713 1077 FunFam leucine-rich repeat receptor-like protein kinase TDR 813 1035 - -
Seca9g02713 1077 Gene3D Transferase(Phosphotransferase) domain 1 813 1035 - -
Seca9g02713 1077 SUPERFAMILY L domain-like 362 678 - -
Seca9g02713 1077 Gene3D Phosphorylase Kinase; domain 1 733 812 - -
Seca9g02713 1077 SUPERFAMILY Tubulin nucleotide-binding domain-like 1031 1052 IPR036525 -
Seca9g02713 1077 ProSitePatterns Protein kinases ATP-binding region signature. 741 764 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02713 Seca-Chr9 40446777 40456452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02713 78 1028 Receptor kinase-like Gene Family AT5G65710 55.475 0.0 1038
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Seca9g02713 Pkinase 9.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02713 - - gmx:100813889 1402.88