Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02693 ATGGCTACGTTGATGAAAAAATCAAATGGGGTCTACTTTCCTGAGGAGAAACTCTGCAAATGGTTCACTCAGATACTATTGGCAGTAGAATACCTACATTCAAATTTTGTTTTACACCGTGACCTACAGTGTTCTAACATCTTTCTCACCAAGGATCAGGATGTTTGCCTAGGGGGTTTTGGGCTTGCTAAGACACTAAAAGCAGATGATTTGGCTTATTAA 222 0.3964 MATLMKKSNGVYFPEEKLCKWFTQILLAVEYLHSNFVLHRDLQCSNIFLTKDQDVCLGGFGLAKTLKADDLAY. 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02693 73 Pfam Protein kinase domain 9 68 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02693 73 Gene3D Transferase(Phosphotransferase) domain 1 1 72 - -
Seca9g02693 73 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 73 - -
Seca9g02693 73 SUPERFAMILY Protein kinase-like (PK-like) 5 69 IPR011009 -
Seca9g02693 73 ProSiteProfiles Protein kinase domain profile. 1 73 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02693 Seca-Chr9 40260631 40262248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02693 19 71 MAP Kinase Gene Family AT4G01370 46.296 7.46e-10 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Seca9g02693 Pkinase 5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02693 K08857 - pvy:116138889 139.428