Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02687 ATGCTTTCTGCTCTTCCTGCTTCCGATCCTTTCCTCGGAAACCCATTCTCGGCGTTGGACGGTGGTTTCACGCCGTGGGATTGTCCTGACTTTTCGTCAGCCTTCAACACCGTCACCTCAAGCTCCGGTTCGGATGTCCCAAATAACCAAACCCATGCAGAAGAAGATAAAAAACCGGGCTCGGACCGGGTAGTTATGGACGAGAGAAAGCGGAGGCGAATGATATCGAACCGGGAATCGGCCCGCAGGTCACGCATGCGTAAACAGAGGCATCTAGAGAATTTACGGAACCAGGTGAATCTGTTTAGGATTGAAAACCGTGAACTGAATAACGGTTTGCAGTTCCTCCTTCACCACTGTAACCGTCTACGAACTGAAAACGATTGGCTCAGATCCGAACGAACCATGCTCTACCAAAAACTGTCCAACATAACTCAAATTTTGGTTTTCCAACAACTGCAACCACCTTTCTCCTCCTCTGCATGGCCATGCAATATTGTCACGGCGGAATAA 513 0.4912 MLSALPASDPFLGNPFSALDGGFTPWDCPDFSSAFNTVTSSSGSDVPNNQTHAEEDKKPGSDRVVMDERKRRRMISNRESARRSRMRKQRHLENLRNQVNLFRIENRELNNGLQFLLHHCNRLRTENDWLRSERTMLYQKLSNITQILVFQQLQPPFSSSAWPCNIVTAE. 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02687 170 CDD bZIP_plant_GBF1 70 121 IPR045314 GO:0003700|GO:0006355
Seca9g02687 170 PANTHER BZIP TRANSCRIPTION FACTOR 44 30 151 - -
Seca9g02687 170 SUPERFAMILY Leucine zipper domain 69 124 IPR046347 GO:0003700|GO:0006355
Seca9g02687 170 Coils Coil 78 112 - -
Seca9g02687 170 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 67 130 IPR004827 GO:0003700|GO:0006355
Seca9g02687 170 SMART brlzneu 65 129 IPR004827 GO:0003700|GO:0006355
Seca9g02687 170 Gene3D - 67 144 - -
Seca9g02687 170 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 72 87 IPR004827 GO:0003700|GO:0006355
Seca9g02687 170 MobiDBLite consensus disorder prediction 50 82 - -
Seca9g02687 170 FunFam BZIP transcription factor 67 118 - -
Seca9g02687 170 MobiDBLite consensus disorder prediction 39 88 - -
Seca9g02687 170 Pfam bZIP transcription factor 69 127 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02687 Seca-Chr9 40169123 40169635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02687 2 152 bZIP Transcription Factor Family AT3G49760 39.623 1.16e-30 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca9g02687 bZIP_1 2.8e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02687 - - gmx:102661188 223.787