Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02686 ATGGAGATTCAGGATGTGAAGGCAGAAAATACTATTCTTGTGGAAGAGAATGAAGAGCTTGAAAAATCTTTAGTTGATATTGATGAGCGAATTCCAAAGGTTGGTATGATATTGGAATCTGAAGAGGAGCTTCATGCTTTTTATAAGAAATATGCTTATGAAGTTGGATTTGGGGTTCGAAAAATTAGCACAAGAACGGATGGTAAAGTCAAGTATTATTCTCTTGGATGTTCCAAAGGAGGCAAATATGTAAGTAGAGCAAGTTCTTCTAAGTTTAGATTGTCTAGCAAAACTGAATGTCAAGCAAAAATTTTTGTGATTGTTCATAGCAGTGGAAATTGTACTATTTCTCGTGTTAATCTAGAGCATAATATGAGTTGGGACCATAGTAGACAAGCTACTGTAGCAAGTTTTGATCATACAACAGAATCAAGTAAAAAATTACTCCCTCCCTTACAAGTGCGCAGCAAAGGTTGTCCACCATCCAAGAGAAAGGAATCCAAAGTAGAGAAAATAATGAAGACAAAAAAGAAGAAAAAAGAGCTTTATGAAGAAAAACAAGGCATTGGACAAGATCACACAAATCTAACAGGGATGACTTACAATTTCAACCATATAGATAGTCAGACTATCCCAACACACCACGTGACAAATCAATATGAAATATGGGAAAGTGTCATATTTGCTGGACAATCACAGGAGCATCAAGAGTATGGGATAATGACCTCTACTGAGAGAAGCTTTGATCTCAATCATTAA 759 0.357 MEIQDVKAENTILVEENEELEKSLVDIDERIPKVGMILESEEELHAFYKKYAYEVGFGVRKISTRTDGKVKYYSLGCSKGGKYVSRASSSKFRLSSKTECQAKIFVIVHSSGNCTISRVNLEHNMSWDHSRQATVASFDHTTESSKKLLPPLQVRSKGCPPSKRKESKVEKIMKTKKKKKELYEEKQGIGQDHTNLTGMTYNFNHIDSQTIPTHHVTNQYEIWESVIFAGQSQEHQEYGIMTSTERSFDLNH. 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02686 252 Coils Coil 3 30 - -
Seca9g02686 252 Pfam FAR1 DNA-binding domain 47 125 IPR004330 -
Seca9g02686 252 Coils Coil 165 185 - -
Seca9g02686 252 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02686 Seca-Chr9 40145264 40147056 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g02686 FAR1 8.9e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02686 - - ecad:122587955 119.783