Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02665 ATGGATACCCTGTTTAGGCTTGTCAGTTTTCAACAACAACCCCAACCTGATCAATCCCTCAATTCCACCACCAGCAGAACATCCAGCAGCTCTAGATCCTCTAGACAAAACTACCACTACCCACAAGAAGACGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACTTATCCTCGTCTTCTTCTAGGCACCACTATTATCCCTATCAGCCCCACCCTTCCACTACCAATACCACCACTCCCACTAACACAATCACAAACACCCCTTCCACTACCACCACCACTGATTTCTCCTTCTCCATCTCACCCACTCGTGACTTCAACTTCGAATTCTCCGGCAAGTGGGCCCAAGACATCCTTCTAGAAGCCGCGCGTGCCATTGCCGACAAAAACAGCTCTCGCCTCCAACAACTCATGTGGATGCTCAACGAACTCAGCTCCCCTTACGGCGACACCGATCAGAAACTCGCCGCTTATTTCCTCCAAGCCTTGTTCTCCCGCATCACCGAAGCTGGAGAACGAACCTACCGAACCTTAACCTCCGCATCGGAAAAAACGTGCTCATTCGAATCAACCAGGAAAACGGTTTTGAAATTCCAAGAGGTTAGCCCCTGGACTACCTTCGGTCACGTCGCTTGCAATGGCGCCATCTTAGAAGCCTTAGAAGGTGAACCAAAGTTGCACATAATTGATATCAGCAACACCTATTGCACTCAATGGCCTACGCTCTTCGAAGCATTGGCCACTCGCACCGACGACACTCCACATCTCCGTTTAACCACCGTCGTCACCGTTAGACCTGGCGGTTCCTCTTCATCTGTTCAAAAGGTTATGAAGGAAATTGGTACCAGAATGGAGAAATTCGCGAGGCTCATGGGCGTTCCGTTCAAATTCAACGTCGTTCATCACGCCGGCAATCTCTCTGAGTTGGATTTCGCTGAGTTAGACATTAAGGAGGACGAGGCGTTGGCTGTTAACTGCGTTAACGCTCTGCATTCCGTAACTACCGTTGGTAACCGCCGTGACACGTTGATAGCTTCGTTGAGAAGATTGCAACCGAGGATAGTGACGGTGGTGGAAGAGGAAGCTGATTTGGATGTTGGATTTGAAGGATTTGAATTCGTGAAAGGATTTCAAGAATGCTTGAGGTGGTTTAGGGTTTACTTTGAGGCGTTGGATGAGAGTTTTCCGAGGACGAGCAACGAGCGATTGATGCTTGAACGATCGGCGGGGAGAGCGATCGTTGACTTGGTGGCTTGTGCGGCGTCGGAGTCGACGGAGAGGCGTGAGACGGCCGCGAGGTGGTCGCAGCGTCTGCATGGCGGTGGGTTCAATACGGTGTCGTTTAGTGAGGAGGTATGTGATGATGTGAGGGCGTTGTTGAGGAGGTATAAGGAAGGGTGGTCAATGACACAGTGTTCCGATGCCGGAATATTCTTGACGTGGAAGGAGCAAGCGGTGGTGTGGGCCAGTGCATGGAGGCCTTGA 1488 0.506 MDTLFRLVSFQQQPQPDQSLNSTTSRTSSSSRSSRQNYHYPQEDEECFNFFMDEEDLSSSSSRHHYYPYQPHPSTTNTTTPTNTITNTPSTTTTTDFSFSISPTRDFNFEFSGKWAQDILLEAARAIADKNSSRLQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRITEAGERTYRTLTSASEKTCSFESTRKTVLKFQEVSPWTTFGHVACNGAILEALEGEPKLHIIDISNTYCTQWPTLFEALATRTDDTPHLRLTTVVTVRPGGSSSSVQKVMKEIGTRMEKFARLMGVPFKFNVVHHAGNLSELDFAELDIKEDEALAVNCVNALHSVTTVGNRRDTLIASLRRLQPRIVTVVEEEADLDVGFEGFEFVKGFQECLRWFRVYFEALDESFPRTSNERLMLERSAGRAIVDLVACAASESTERRETAARWSQRLHGGGFNTVSFSEEVCDDVRALLRRYKEGWSMTQCSDAGIFLTWKEQAVVWASAWRP. 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02665 495 ProSiteProfiles GRAS family profile. 107 494 IPR005202 -
Seca9g02665 495 MobiDBLite consensus disorder prediction 10 37 - -
Seca9g02665 495 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 94 486 IPR005202 -
Seca9g02665 495 MobiDBLite consensus disorder prediction 71 91 - -
Seca9g02665 495 MobiDBLite consensus disorder prediction 10 39 - -
Seca9g02665 495 Pfam GRAS domain family 118 494 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02665 Seca-Chr9 39956828 39958315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02665 1 495 GRAS Transcription Factor Family AT4G37650 62.756 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca9g02665 GRAS 6.8e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02665 - - gmx:100820459 750.74