Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02656 ATGGGTAGCTCTGGCATCTCTTTTTCTTTGTCTAGCCTTATGTGTGAAGAAGGGGAAGATAGCTTCTTTGAAGATGAAGATGAAAACACTTGCATTATTAACTCACTTGATGATGATAACAACACATGTTTTGTTTTGGAGGATGAAGAGGAATACATTGAGTATTTGTTCACTCAAGAAAGGGGATTTGGATCCCAGATTCATTTATTGTCTTGTGATGATCATTCAAACAGACACTGGTTATGGAGTGCTCGCTTGGATGCCATTGATTGGATTTTCAATACACAAGCAAAATTTGGATTCAATGTTCAGACAGCTTATTTATCAGTGACTTACTTTGATCGGTTTCTTTCAAAGCGATCCATAGATGAATCAAAACCTTGGGCTATTCAATTGTTATCAGTGGCATGTTTATCCCTGGGAGCAAAGATGGAAGAGCAGAGGGTGCCCCCTCTCTATGAATATCCAATAGAAGAATATCGCTTTGAGAACAAAGTTATTAAGAACATGGAGCTTATGATTTTGGGTACCTTGGAATGGAGAATGGCATCACCAACTCCTTTTGCTTATTTGCATTACTTTGTTAACAAGTTCTGCCCTGGATCCAGACCAGAAACAATAATCACAAAAGCAATGGAACATATTGTGGCCATGGTCAAAGGTATGTTAATTTGA 675 0.3807 MGSSGISFSLSSLMCEEGEDSFFEDEDENTCIINSLDDDNNTCFVLEDEEEYIEYLFTQERGFGSQIHLLSCDDHSNRHWLWSARLDAIDWIFNTQAKFGFNVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLGAKMEEQRVPPLYEYPIEEYRFENKVIKNMELMILGTLEWRMASPTPFAYLHYFVNKFCPGSRPETIITKAMEHIVAMVKGMLI. 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02656 224 FunFam Cyclin-D5-1 80 183 - -
Seca9g02656 224 CDD CYCLIN_AtCycD-like_rpt1 84 180 - -
Seca9g02656 224 SMART cyclin_7 90 176 IPR013763 -
Seca9g02656 224 PANTHER CYCLINS 45 195 IPR039361 -
Seca9g02656 224 Gene3D - 184 218 - -
Seca9g02656 224 Pfam Cyclin, N-terminal domain 53 182 IPR006671 -
Seca9g02656 224 Gene3D - 79 183 - -
Seca9g02656 224 ProSitePatterns Cyclins signature. 85 116 IPR006671 -
Seca9g02656 224 SUPERFAMILY Cyclin-like 40 182 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02656 Seca-Chr9 39860940 39863334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02656 9 220 Core Cell Cycle Gene Families AT4G37630 38.073 3.07e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02656 K18811 - gmx:100798140 333.954