Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca9g02655 | ATGGACGGCAACTGTTGTAAATCTCTCCGGAATGCCAAGCAATTTATTCCGTTACCTCCTCCGTTGCCCCATTCAGCAGCAACCAGTTTTCCTTGCAAGTGTCTGGTGACCAATAATTCAGCATCAAGAGGGCACAGTCGCAGCGTCTCTTCATCAACAAGAGATTTGTGGGACCGTCTTTTTGATGAAGGTTATAAAGCAGACGTTTGCATCAATACTGATAACGGTGGAATTGTTTATGCTCATTCTAACATTCTTGCCATGGCTTCTCCTGCATTGAGGGGGATGTTGAAGCAAGCAAAGCGTCACAAGAGATGGCGATCAATCTCAATCTTAGGGGTTCCACATGATGCAGTCCGAGTTTTTATTCGATTCCTGTACTCTTCCTGTTATGAGAAGGAAGAAATGGAGGAATTCATCCTACAATTGTTGGTGCTGTCACATGTATACGTGGTCCCTCATTTGAAGCGTGAATGTGAAGAGAAGCTAGAATTGGGCTACCTCACCATAGATAACGTGGTTGATGTATTTCAACTTGCGTTACTGTGTGATGCTCCAAGGCTCAGCCTCATTTGTCACCGTACGATACTAAAAAACTTTAAAGTTGTCTCGGAATCAGAAGGATGGAAGGCAATGAAGCAGAGCCACCCAGTTCTAGAAAAGGAAGTTCTGGAGTCAGTGATTGATGAAGAAAATAGTAAGAAGGAGAGGATGAGAAAAATCAATGAAAGAGAGATCTATCTGCAATTATACGATGCAATGGAAGCTCTTGTTCACATATGCAGAGATGGTTGTAAAACTATTGGTCCTCATGATAAAGACTTCAAAGCAAATCAACCGTGCAAGTATGCAGCCTGCAAGGGACTAGAATTACTTGTACGTCATTTTGCTGGGTGTAAATTGAGAGTTCCAGGGGGTTGTGTTCATTGCAAGAGGATGTGGCAACTATTGGAGTTGCATTCTCGACTATGTGCTGATCCTGATTACTGTAGAGTTCCTTTGTGCAGGAACTTTAAGCAGCGAATATCAAAACAAAGCAAGAAAGATGAAATTAGATGGAAAATATTGGTTGAGAAGATATTGAGAACAAGAGGAATTGGAATAGCACCGTGCTTTCGGCCGCAATGA | 1128 | 0.4238 | MDGNCCKSLRNAKQFIPLPPPLPHSAATSFPCKCLVTNNSASRGHSRSVSSSTRDLWDRLFDEGYKADVCINTDNGGIVYAHSNILAMASPALRGMLKQAKRHKRWRSISILGVPHDAVRVFIRFLYSSCYEKEEMEEFILQLLVLSHVYVVPHLKRECEEKLELGYLTIDNVVDVFQLALLCDAPRLSLICHRTILKNFKVVSESEGWKAMKQSHPVLEKEVLESVIDEENSKKERMRKINEREIYLQLYDAMEALVHICRDGCKTIGPHDKDFKANQPCKYAACKGLELLVRHFAGCKLRVPGGCVHCKRMWQLLELHSRLCADPDYCRVPLCRNFKQRISKQSKKDEIRWKILVEKILRTRGIGIAPCFRPQ. | 376 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca9g02655 | 375 | Pfam | TAZ zinc finger | 252 | 335 | IPR000197 | - | |
Seca9g02655 | 375 | SUPERFAMILY | TAZ domain | 244 | 344 | IPR035898 | - | |
Seca9g02655 | 375 | SMART | BTB_4 | 67 | 167 | IPR000210 | GO:0005515 | |
Seca9g02655 | 375 | Gene3D | Potassium Channel Kv1.1; Chain A | 36 | 166 | IPR011333 | - | |
Seca9g02655 | 375 | SMART | TAZ_2 | 244 | 336 | IPR000197 | - | |
Seca9g02655 | 375 | FunFam | BTB/POZ and TAZ domain-containing protein 3 | 46 | 166 | - | - | |
Seca9g02655 | 375 | FunFam | BTB/POZ and TAZ domain-containing protein 2 | 169 | 239 | - | - | |
Seca9g02655 | 375 | Gene3D | - | 168 | 241 | - | - | |
Seca9g02655 | 375 | PANTHER | BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED | 38 | 367 | IPR044513 | - | |
Seca9g02655 | 375 | CDD | BACK | 169 | 229 | - | - | |
Seca9g02655 | 375 | ProSiteProfiles | BTB domain profile. | 67 | 135 | IPR000210 | GO:0005515 | |
Seca9g02655 | 375 | Pfam | BTB/POZ domain | 59 | 163 | IPR000210 | GO:0005515 | |
Seca9g02655 | 375 | Gene3D | TAZ domain | 242 | 363 | IPR035898 | - | |
Seca9g02655 | 375 | SUPERFAMILY | POZ domain | 47 | 163 | IPR011333 | - | |
Seca9g02655 | 375 | FunFam | BTB/POZ and TAZ domain-containing protein 2 | 241 | 365 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca9g02655 | Seca-Chr9 | 39832567 | 39837914 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | TAZ | Seca9g02655 | BTB | 2e-12 | CL0033 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca9g02655 | - | - | lja:Lj2g3v1968190.1 | 655.21 |