Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca9g02653 | ATGGGTGCTCATGAACCAGCGAAGCTGCGGTGGGGAGAACTCGAAGAAGACGACGGTGAGGATCTCGACTTCCTCTTGCCGCCTCGCCAGGTCATAGGTCCTGACGAAAGCGGCATAAAGAAGGTCATTGAGTACAAATTCGACGATGACGGCAACAAGGTCAAGATCACCACAACCACTCGCACCCGCAAGCTTGCCAACGCCCGACTCAGCAAACGCGCCGTCGAACGCCGCTCCTGGCCCAAGTTCGGCGACGCCGTCCACGAGGACGTTGGCAGCCGCCTCACCATGGTCTCCACCGAAGAGATCCTCCTCGAACGCCCCAAGCCTCTTGGTTCCAAATCAGAGGAAACAAAGGCTGCTGGAGACCCGTTGTCTCAATTCCAAAAAGGTGCTGTTCTTATGGTCTGCAGGACTTGCGGGAAGAAAGGTGACCATTGGACTTCAAGGTGTCCATACAAGGATCTTGCCCCTCCATCTGAGGGATTCGTGGATAAGCCTGCTGGCGCGGATGTTGCGGCTGCCGCTGCTGGATCCACCAAGGGAGCATATGTACCCCCTGGCATGAGAGCAGGTGCAGAGAGGACTAGTGGATCAGACATGCGGCGTAGGAACGATGAAAATTCTGTGCGGGTAACCAACCTCTCAGAGGACACAAGGGAGCCTGATTTGCTTGAGCTGTTCCGTCCATTTGGTCCTGTTAGTAGAGTCTATGTTGCTATTGATCAGAAAACTGGTATGAGCAGGGGATTTGGTTTTGTTAACTTTGTCAGCCGAGAAGATGCTCAAAGAGCTATCAACAAACTGAATGGATATGGCTACGACAGTCTCATCCTGAGAGTTGAATGGGCCACCCCAAGGACAAACTGA | 870 | 0.5368 | MGAHEPAKLRWGELEEDDGEDLDFLLPPRQVIGPDESGIKKVIEYKFDDDGNKVKITTTTRTRKLANARLSKRAVERRSWPKFGDAVHEDVGSRLTMVSTEEILLERPKPLGSKSEETKAAGDPLSQFQKGAVLMVCRTCGKKGDHWTSRCPYKDLAPPSEGFVDKPAGADVAAAAAGSTKGAYVPPGMRAGAERTSGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGPVSRVYVAIDQKTGMSRGFGFVNFVSREDAQRAINKLNGYGYDSLILRVEWATPRTN. | 290 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca9g02653 | 289 | CDD | eIF3G | 38 | 155 | IPR024675 | - | |
Seca9g02653 | 289 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 208 | 286 | IPR000504 | GO:0003723 | |
Seca9g02653 | 289 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G | 20 | 285 | - | - | |
Seca9g02653 | 289 | CDD | RRM_eIF3G_like | 209 | 284 | IPR034240 | - | |
Seca9g02653 | 289 | SMART | rrm1_1 | 209 | 282 | IPR000504 | GO:0003723 | |
Seca9g02653 | 289 | MobiDBLite | consensus disorder prediction | 185 | 207 | - | - | |
Seca9g02653 | 289 | Hamap | Eukaryotic translation initiation factor 3 subunit G [EIF3G]. | 8 | 288 | IPR017334 | GO:0003743|GO:0005737|GO:0005852 | |
Seca9g02653 | 289 | Gene3D | - | 177 | 289 | IPR012677 | - | |
Seca9g02653 | 289 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 210 | 275 | IPR000504 | GO:0003723 | |
Seca9g02653 | 289 | FunFam | Eukaryotic translation initiation factor 3 subunit G | 172 | 289 | - | - | |
Seca9g02653 | 289 | SUPERFAMILY | RNA-binding domain, RBD | 195 | 288 | IPR035979 | GO:0003676 | |
Seca9g02653 | 289 | PIRSF | Transl_init_eIF-3_RNA-bind | 2 | 289 | IPR017334 | GO:0003743|GO:0005737|GO:0005852 | |
Seca9g02653 | 289 | Pfam | Eukaryotic translation initiation factor 3 subunit G | 30 | 156 | IPR024675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca9g02653 | Seca-Chr9 | 39783444 | 39785003 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca9g02653 | 7 | 287 | Eukaryotic Initiation Factors Gene Family | AT3G11400 | 69.231 | 8.40e-153 | 428 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca9g02653 | K03248 | - | gmx:100818725 | 531.946 |