Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02645 ATGAGTTGCAACGGTTGCCGAGTCCTTCGAAAGGGTTGCAGCGAGTCCTGTATCTTGCGCCCTTGTCTTCAGTGGATCGACACCCCTGAAGCTCAAGGCCATGCTACTGTCTTTGTAGCCAAATTCTTCGGCCGTGCAGACCTCATGTCCTTCATTTCCAACGTCCCTGAACCCCAAAGACCTGCTCTGTTTCAATCTCTGTTGTTCGAAGCGTGTGGACGAACGGTGAACCCTGTCAACGGTGCCGTGGGGCTTTTATGGACTGGAAACTGGCACGTGTGCCAGGCGGCGGTTGAGACGGTGCTCCGTGGCGGCACCCTGAGACCCATGCCGGAGCTCCTTGGCCTAGACGCTCCCACTCCCACCGCCGATGACGCGTCTGAAGGGGAAGTCACATGTAACGACATGTGGAGGGTCCGAGATCCGAACCCGAATTTACGGTTCACGCACTCGCGGTCTAATAAGGTCGCTTCCGGCGGTAAACGCAAGCGATCAGAGGAACTAGCCAAGCTTCAGACGACGGCTGATCTCAATCTCCGGCTGACACCGAGTTTCCTTCAGAACGTGTCGTCCTACGGCTGCCGACGAGAAATTCGCCGGCCGGGATCGCCGTCGATGAATTCAGAGGAATCCGTGACTACGGCGACGTGCTTGGAGACTGGGATCGGAGATCACTACGCTCACGACGGAGACCGGAAAGTGCTCAACCTTTTCATTTGA 720 0.5667 MSCNGCRVLRKGCSESCILRPCLQWIDTPEAQGHATVFVAKFFGRADLMSFISNVPEPQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPMPELLGLDAPTPTADDASEGEVTCNDMWRVRDPNPNLRFTHSRSNKVASGGKRKRSEELAKLQTTADLNLRLTPSFLQNVSSYGCRREIRRPGSPSMNSEESVTTATCLETGIGDHYAHDGDRKVLNLFI. 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02645 239 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Seca9g02645 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 220 - -
Seca9g02645 239 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02645 Seca-Chr9 39674079 39675755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02645 1 238 AS2 family AT3G49940 55.078 2.17e-85 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Seca9g02645 LOB 6.6e-26 No_clan