Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02641 ATGGCTCAGCTTAATCTTGTACTTGTGTGGTTACTCTTCTTAAACTTGTGCCTTTATTCATGTCCTATTTCGGCCCAGCTAAGTAGACACCACTACGCAAATTCCTGCCCCAATGTTGAAAACATTGTCAGAGAAGCAGTTAAAAAGAAATTTCATCAAACTTTTGTCACAGTTCCTGCTACTCTACGTCTCTTCTTCCACGATTGCTTTGTCCAGGGTTGTGATGCTTCTGTTCTGGTAGCATCCACGCGAAACAACAAAGCAGAGAAGGATCACCCAGACAATCTTTCATTGGCTGGAGATGGATTTGACACAGTGATCAAAGCAAAAGAAGCAGTGGATGCTGTCCCACTTTGTAGAAATAAAGTCTCATGCGCTGATATCCTTGCACTGGCAACCAGGGATGTTATTTCACTGGCTGGTGGACCTTACTATGAGGTTGAATTGGGAAGATTTGATGGGCTAAGATCTAAAGCCTCAGATGTAGAAGGGAGGCTCCCTCAACCGGGCTTCAACTTGAACCAGCTTAATTCCCTGTTTGCGGCAAACGGGCTTACCCAAACAGAAATGATTGCTCTCTCAGGTACTACTAATACGCGTGCTTAA 606 0.4422 MAQLNLVLVWLLFLNLCLYSCPISAQLSRHHYANSCPNVENIVREAVKKKFHQTFVTVPATLRLFFHDCFVQGCDASVLVASTRNNKAEKDHPDNLSLAGDGFDTVIKAKEAVDAVPLCRNKVSCADILALATRDVISLAGGPYYEVELGRFDGLRSKASDVEGRLPQPGFNLNQLNSLFAANGLTQTEMIALSGTTNTRA. 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02641 201 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g02641 201 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g02641 201 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g02641 201 PRINTS Haem peroxidase superfamily signature 189 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g02641 201 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g02641 201 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g02641 201 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g02641 201 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g02641 201 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g02641 201 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g02641 201 PANTHER - 8 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g02641 201 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Seca9g02641 201 Pfam Peroxidase 43 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g02641 201 FunFam Peroxidase 30 177 - -
Seca9g02641 201 SUPERFAMILY Heme-dependent peroxidases 26 195 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca9g02641 201 ProSiteProfiles Plant heme peroxidase family profile. 26 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g02641 201 Gene3D - 31 167 - -
Seca9g02641 201 Gene3D Peroxidase, domain 2 168 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02641 Seca-Chr9 39621575 39624610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02641 24 195 Peroxidase AT4G37530 75.581 1.58e-93 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02641 K00430 - gmx:100804350 356.681