Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02610 ATGATACCAAAACTATTAGAGGGATTAGATGGAAGGTTCGGTGACTTTCAAACCCACAGGGGGGATTTCGCAAACAGAGACGGAGCTATCAGGGTTGTGCTTCTGGTAGAATGTGCAAAGCTTGTTGTGAAGGGAAGAAACCAAGGTTACGGGCTTCCAGCTGATATGTGGAGTCTTGGATGCACTGTGCTTGAGATTATATTAGGCCAAATTCCATACTCTGATTTTGAATGTGGCTTGTTCATGTCTAGAGAAGTTTTCATGTCTAGATAG 273 0.4322 MIPKLLEGLDGRFGDFQTHRGDFANRDGAIRVVLLVECAKLVVKGRNQGYGLPADMWSLGCTVLEIILGQIPYSDFECGLFMSREVFMSR. 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02610 90 Gene3D Transferase(Phosphotransferase) domain 1 19 87 - -
Seca9g02610 90 ProSiteProfiles Protein kinase domain profile. 1 90 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02610 90 SUPERFAMILY Protein kinase-like (PK-like) 47 77 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02610 Seca-Chr9 39256254 39259611 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02610 38 77 MAP Kinase Kinase Kinase AT4G08500 57.500 1.96e-11 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02610 K13414 - gmx:100819999 71.2478