Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02601 ATGGCTCAACCTCAACAACGCTCTCCCTCACTCCTCTGTGATGAAGAACAACACACTTTTGAGGAGGAAGATTTTGGAGAGAGTGACCCCCATGTCTCAAAGCCCCCAACTTTACCTATAACATTGCTGGAGGAGGGACACGATGACCTCCTCTCTCTAATCTCCAAAGAGAAAAGCACCCATTTCTATTTCACTACCAATGAGACTCTAACTCTTCTTGAGAGTACTCACAACGGCGCCGTGCGCTGGATTTCTAGAGTTTCTGCCTTCTATGGTTTCTCTGCTTCGACAACTGTTCTTGCCGTCAACTACTTTGATAGGTTCGTAACAAGCCTAAGCTTTCAATGGGATAAGCCATGGGTGACTCAGCTCACTGCAGTTGCTTGTGTTTCTCTTGCTGCCAAAATGGAGGAGACCCATGTCCCACTTCTTTTGGAGCTGCAAGTGGCAGAATCAGAGTTCTTGTTTCAACCAAAGACCATACAGAGGATGGAGCTCCTCGTGTTGTCCACTCTTAAGTGGAGGATGAACCCTGTGACCCCAATTTCCTTCTTTCAACACTGTGTCAGAAGGCTTGGATTAAAGAGTCCCTTGCATTGGGAGTTTCTGAGTAGGTGTGAACAAGTTCTTCTCTGTGTCATTGCGGATTCAAAGGTTATGAGTTATCTTCCTTCTACACTGGCTGCTGCTATAATGATCCATGTTATTAAAGAGATTGAACAATTTAATACACCGGAATACAAAAATCAGCTTGCAAATTTACTCAGAGCTTGTGAGGAAGAAGTGAATGGATGCTACAAATTCATGGTGAAAGGATTAGTTTGTGATGAAGGCGTTCGCAATCTTGGCCAAAAACGCAAACGCCTATCTGAACCAAGTAGCCCTGGTGGGGTCATTGATGCACGTTTCAGCTGTGACAGCTCAAATTCAAATGAGTCATCACTTTCACTGGAGGAGCTAGTGCCTGAGGGGGCTTCTCGTGATGATCTAAATAGTCCTCGTTATTAA 1008 0.4484 MAQPQQRSPSLLCDEEQHTFEEEDFGESDPHVSKPPTLPITLLEEGHDDLLSLISKEKSTHFYFTTNETLTLLESTHNGAVRWISRVSAFYGFSASTTVLAVNYFDRFVTSLSFQWDKPWVTQLTAVACVSLAAKMEETHVPLLLELQVAESEFLFQPKTIQRMELLVLSTLKWRMNPVTPISFFQHCVRRLGLKSPLHWEFLSRCEQVLLCVIADSKVMSYLPSTLAAAIMIHVIKEIEQFNTPEYKNQLANLLRACEEEVNGCYKFMVKGLVCDEGVRNLGQKRKRLSEPSSPGGVIDARFSCDSSNSNESSLSLEELVPEGASRDDLNSPRY. 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02601 335 FunFam D6-type cyclin 60 177 - -
Seca9g02601 335 MobiDBLite consensus disorder prediction 305 335 - -
Seca9g02601 335 SUPERFAMILY Cyclin-like 44 177 IPR036915 -
Seca9g02601 335 CDD CYCLIN_AtCycD-like_rpt2 179 269 - -
Seca9g02601 335 CDD CYCLIN_AtCycD-like_rpt1 78 174 - -
Seca9g02601 335 SMART Cyclin_C_2 179 306 IPR004367 -
Seca9g02601 335 Pfam Cyclin, C-terminal domain 179 277 IPR004367 -
Seca9g02601 335 Gene3D - 63 177 - -
Seca9g02601 335 PANTHER CYCLINS 53 271 IPR039361 -
Seca9g02601 335 Pfam Cyclin, N-terminal domain 60 177 IPR006671 -
Seca9g02601 335 SMART cyclin_7 82 170 IPR013763 -
Seca9g02601 335 SUPERFAMILY Cyclin-like 161 273 IPR036915 -
Seca9g02601 335 Gene3D - 178 267 - -
Seca9g02601 335 FunFam CYCLIN D32 178 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02601 Seca-Chr9 39153150 39154787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02601 27 311 Core Cell Cycle Gene Families AT5G67260 48.084 6.62e-82 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02601 K14505 - gmx:100785030 362.073