Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02596 ATGAAATTTGCTATTTTTTACTGTCAATTACTTGCTGGGAATTTTTTGCAGTTCTTCCCAACTGCAGAGGAAGCTATTGATTACTTTAACCAGAAAAGATGTGTAGATGGAAAGGCTCTAGTTCTCCCTAGTCAGATTAGATATGTCAAATACTTTGAACGGACTTTAACACACTTCAATGGAGAAGTCCAGCCTAGACGAAGGTGCATGCTAAGAGGGCTTCGGCTTCACAAGTGCCCTTATTAG 246 0.3984 MKFAIFYCQLLAGNFLQFFPTAEEAIDYFNQKRCVDGKALVLPSQIRYVKYFERTLTHFNGEVQPRRRCMLRGLRLHKCPY. 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02596 81 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 15 80 - -
Seca9g02596 81 Gene3D Protein tyrosine phosphatase superfamily 4 71 IPR029021 -
Seca9g02596 81 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 18 56 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02596 Seca-Chr9 39125240 39125698 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02596 4 81 Protein tyrosine phosphatase (PTP) family AT3G19420 73.077 7.73e-39 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02596 K01110 - gmx:100801622 139.043