Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02594 ATGGGGAGGACAGGACTGATGGTGTGTTGTCTTCTTTTGTTTCTTAAGTTCTTCCCAACTGCAGAGGAAGCTATTGATTACTTTAACCAGAAAAGATGTGTAGATGGAAAGGCTCTAGTTCTCCCTAGTCAGATTAGATATGTCAAATACTTTGAACGGACTTTAACGCACTTCAATGGAGAAGTCCAGCCTGGACGAAGGTGCATGCTAAGAGGGTTTCGGCTTCACAAATGCCCTTATTGGGTTAGACCATCCATTACAATATCTGATCATAGTGGAATTCTTTTCACAACAAGAAAGCATCCCAAAACAAAGGATCTAATGCCAGAAGATTTCTGGATCAGTGCACCGAAGAAAGGAATTGTGGTCTTTGCATTACCAGGGGAGCCAGGTCTGACAGAGTTGGTTGGCGACTTCAAAATTCATTTTCATGACCGACAGGGAGATTTCTACTGTTGGATGAATACAGCAATGACAGAAAATCGAAGAATTTTAGATGGCTCAGATTTCGATGATTTTGACAAGAGAAAGATCCCTGCTCCAGGGTTCCAGGTCGAAATTGTGATGGTAGACTATAATGGCACCCTACCTGCAAGGACAAAAGCCAATCCTGCAAGCAAAGGATCTGACGGCAACACAAGCAATGACAAAGCAGGTGCAGGGCCTACATCTAATTCAAGTGAGAGTAAGGGTCCTAGAAATGGAGATGATGATGTATTCTCGGATAGTGATGAAGAGGAGACGAAGGGAACACAAAGGAAGGAAACTGCAACTGAGTACGCACCTCATCAAGTATCTGAGGCCACTACAGACCATGTAGGGATGTTAGCACATAAAACAGATCAGTTGTCACTCCAGCATGAGGAACACACACAAAACAATTCTTCTCAAGAATCAACTGCAGATAAAGTTCATAAAATCCATGCAGGCCCTAACACCACTAACATGGAATCTGTGGGGGCTAATGATATCAAAGCAATTGCAGCAGATGCTTCAGTTTTTTCTTTTGGTGATGAAGATTTTGAGAGTGATTGA 1035 0.4261 MGRTGLMVCCLLLFLKFFPTAEEAIDYFNQKRCVDGKALVLPSQIRYVKYFERTLTHFNGEVQPGRRCMLRGFRLHKCPYWVRPSITISDHSGILFTTRKHPKTKDLMPEDFWISAPKKGIVVFALPGEPGLTELVGDFKIHFHDRQGDFYCWMNTAMTENRRILDGSDFDDFDKRKIPAPGFQVEIVMVDYNGTLPARTKANPASKGSDGNTSNDKAGAGPTSNSSESKGPRNGDDDVFSDSDEEETKGTQRKETATEYAPHQVSEATTDHVGMLAHKTDQLSLQHEEHTQNNSSQESTADKVHKIHAGPNTTNMESVGANDIKAIAADASVFSFGDEDFESD. 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02594 344 SMART PTEN_C2_2 63 191 IPR014020 -
Seca9g02594 344 ProSiteProfiles C2 tensin-type domain profile. 65 192 IPR014020 -
Seca9g02594 344 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 1 303 - -
Seca9g02594 344 MobiDBLite consensus disorder prediction 199 318 - -
Seca9g02594 344 Gene3D Protein tyrosine phosphatase superfamily 1 64 IPR029021 -
Seca9g02594 344 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 2 55 IPR029021 -
Seca9g02594 344 MobiDBLite consensus disorder prediction 199 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02594 Seca-Chr9 39108913 39112007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02594 1 344 Protein tyrosine phosphatase (PTP) family AT3G19420 57.910 1.43e-142 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02594 K01110 - gmx:100801622 596.275