Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02593 ATGGAACCAGCAGCTGCTGACTCCTCATCTCAACCTACTCCTCCAGCTTCTAATACCGAACATCACTCCACCAAAGTAACTTCGCCAATTGGCAATGCACATGATTCACCATCGTTGTCACCCACTGCTGGCATATCATCCTGGGCAAGAAATCTGAAACTCCCACAGTCCCTTGGGCTTGGGGCAGCACAACAGGACTCACAGACTGAAACTAATGGCATGTCAGCTTTTGCCCGCTTGACTAGTGGGCTTGGATTACGAGTGCCCTCAAATGAGACTTCTCCAACCAATGCAGGAGCTGAGCAACCTAATTTAATTGAATCATTCACCAAAGGGTTGATGGACTCTTCCAAGAGTGCAGTAAAGGCTGTGCAGACCAAAGCACGCCATATTGTCTCTCAAAATAAACGCAGATACCAGGAAGGTGGATTTGATTTGGATATGGCATACATCACTGAAAATATAATTGCTATGGGATTTCCGGGTGGTGACTTTAGCTCTGGAATTTTCGGATACATTGAGGGTTTCTATCGCAATCACATGGAAGAAGTAATCAAGTTTTTTGAAACTCATCATAAGGTACCAAAATATCTATTTTAA 600 0.4417 MEPAAADSSSQPTPPASNTEHHSTKVTSPIGNAHDSPSLSPTAGISSWARNLKLPQSLGLGAAQQDSQTETNGMSAFARLTSGLGLRVPSNETSPTNAGAEQPNLIESFTKGLMDSSKSAVKAVQTKARHIVSQNKRRYQEGGFDLDMAYITENIIAMGFPGGDFSSGIFGYIEGFYRNHMEEVIKFFETHHKVPKYLF. 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02593 199 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 115 197 - -
Seca9g02593 199 Gene3D Protein tyrosine phosphatase superfamily 122 199 IPR029021 -
Seca9g02593 199 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02593 Seca-Chr9 39104671 39107378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02593 43 193 Protein tyrosine phosphatase (PTP) family AT3G19420 61.783 2.52e-61 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02593 K01110 - gmx:100801622 325.094