Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02575 ATGCAGTTTGTTCTTGATGCTTACCGAAAGGGTGATAAATTGAAGTTTGCAAACCATTCTCCGGATCCAAATTGCTATGCAAAGGTTATTATGGTTGCTGGAGATCATAGGGTAGGCATTTTTGCCAAGGAACGGATTTGTGCTGGGGAGGAACTGTTTTATGATTATCGATACGAGCCTGATAGAGCTCCTGCCTGGGCTCGGAAGCCGGAGGCATCTGGATCAAAAAAAGAGGACGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTAGCTTAA 276 0.4565 MQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERICAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSSGRAKKLA. 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02575 91 Gene3D SET domain 1 64 IPR046341 -
Seca9g02575 91 ProSiteProfiles SET domain profile. 1 57 IPR001214 GO:0005515
Seca9g02575 91 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 2 90 IPR045318 GO:0006338|GO:0042054
Seca9g02575 91 MobiDBLite consensus disorder prediction 66 84 - -
Seca9g02575 91 Pfam SET domain 5 56 IPR001214 GO:0005515
Seca9g02575 91 SUPERFAMILY SET domain 3 60 IPR046341 -
Seca9g02575 91 MobiDBLite consensus disorder prediction 66 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02575 Seca-Chr9 38899386 38900276 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02575 2 61 EF-hand Containing Proteins AT5G13960 34.375 2.83e-06 42.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Seca9g02575 SET 3.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02575 - K11430 cave:132188390 190.66