Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02530 ATGGACATGGCTCAGGTCGGTGTCAGGACTCGAGCACGAACCGCATTAGCCATGAGAGCTGCTTCAGCTGCACGAACACCGAACAAGAGAAGGAAGATCAACAACAGCAACGAAGAGCAGCGAAAATTCTCAACAGCATCGTCGGCATTTGTTCACCTCAAGACTCGGAGCAGGAGTTCTACCGTAGTCAAACCGGAGACGGAGACGGTTCTGCCGGAAACGGAGGAACGCTGCTCCGATGAATTTCCGGCGTCTTGTTGTTCGAGCAACGGATCCATTGGAATTGATAAGGATAGGATCGAATCGTTAGATCTGGAGGTGGAGAGCGCGCAAGTTGAAACGTCGACGTGCAATTGCGGTGAAGAAAATGAGAGGAGAGAGATGAGCTATTCAAGCGAGCTTAGAGAAAACTCACAAGAGCTGGAGTCAATGGAGACCAATTCTCACCTTCCAAGATCAACGGCGCAAAATATGCCAACGGAATTGGAGCTTGAAGAATTTTTTGCAACCGCCGAGAAAGACATTCAGAAACGGTTTCAAGACAAATACAATTTCGATATTGTGAAGGACGTGCCATTGGAAGGACGCTACGAGTGGGTTCAGTTGAAGCCATGA 615 0.4878 MDMAQVGVRTRARTALAMRAASAARTPNKRRKINNSNEEQRKFSTASSAFVHLKTRSRSSTVVKPETETVLPETEERCSDEFPASCCSSNGSIGIDKDRIESLDLEVESAQVETSTCNCGEENERREMSYSSELRENSQELESMETNSHLPRSTAQNMPTELELEEFFATAEKDIQKRFQDKYNFDIVKDVPLEGRYEWVQLKP. 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02530 204 PIRSF CKI_KRP_plant 3 204 IPR044275 GO:0004861|GO:0045736|GO:0051726
Seca9g02530 204 Pfam Cyclin-dependent kinase inhibitor 158 202 IPR003175 GO:0004861|GO:0005634|GO:0051726
Seca9g02530 204 Gene3D p27 151 204 IPR044898 -
Seca9g02530 204 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 5 203 IPR044275 GO:0004861|GO:0045736|GO:0051726
Seca9g02530 204 MobiDBLite consensus disorder prediction 18 76 - -
Seca9g02530 204 MobiDBLite consensus disorder prediction 39 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02530 Seca-Chr9 38505299 38507624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02530 158 204 Core Cell Cycle Gene Families AT5G48820 65.957 9.88e-18 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02530 - - gmx:547743 226.483