Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02508 ATGCGCTGGTTTCCCACCCTCATTTTCTCCCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCATCTTCATCTTCATCTTCTCCTTCTTCATCCTCTTCTCCGACAATTCTAAAATCCTCCCCGTCCACCTCCTCCCTCCCTGACCACAGAAAGAACACCCGCAGCACGTGGCTCTTCGGCAGTGGCAAAAGATCCACGCGCTCCAGGAAGCTCCGCCACGTCGATCACGATGACTCCGAATACGACGCCGTCGCGGCGCCTTTCTCTCGTTCCCCAAGCACCCGCAGCTACATTCGTTCCAACACCAACACCGCCACCTCCTCCGTAGCGCCTCAGCCATTGCCATTGCCGGAACTAGCGTCCCCTGCGCAACATCGCCAAAGAGACGCCGATTGCCGTTTGCCGTCGCCCAAAGACGCTGCCTCCGCCGCTCCCTGTAGAGGACCAGAACCTGATGGCGCTGTGGACGCTTCTCTCACCACTGGCTTTAGGATGCGCAGTGTTTTTGCTAGGCAAGAGACAAGAAGGAATACAGAGCATGTGGAGATAAGGTCACCTGGTAGTGGGATGGTGCGTCAAGATGCGAGTGGTTCTGCAACTTCAAGCAGTGCTCGAGGAAATAACTTCTGCATCAGTGTCCCTGCTAGGAGTGCTCCTAGCAGTCCCTTTGCCAGCCCTACAATCAGCCCAAAGAATACCCAAAACGATGATTTTGTGCCATATTATTATGTGTCACCCAAAGGAAATCAGTTCTGGTCTGCACCAGAGATGCCCACCTCTCAAACATTAGCTGGCCAACCACCTCCTGCTTTCTTTGATTTTTCAGCATTAGGCACTGATAATGCTTCTTCTCCCCACCCTAAAAGCCCAACTAAACCTTCTTCACCCATGCCCAGGTTATCCTTTGAGACCTCAACAGCACGTCGTGAGAGTATTGCTCCTCTCACTGTTCACCCTTTACCATTGCCTCCTTGGGCTGGGTCAGCCTTACCTTCACCGTCTGCTACCTTTTCCCAACCTGTGGCTCGGACAGAACCCTTGTCAATGAAAAGCCAATGGCAAAAAGGGAAACTTATAGGAAGAGGTACTTTTGGAAGTGTTTATGTTGCCACTAACAGAGAAACTGGAGCGTTGTGTGCAATGAAGGAAGCAGAAATATTTTCTGATGATCCAAAATCTGCAGAGTGTATAAAGCAGTTAGAGCAGGAAATTAAAGTTCTTAGCAATCTGAAACATCCAAATATTGTGCAGTATTTTGGTAGTGAAATAGTAGAAGACAAGTTTTATATTTATTTGGAATATGTCCATCCCGGTTCCATAAATAAATATGTTCGCGAACATTGTGGTGCGATAACAGAATCTGTTGTTCGGAATTTCACGCGCCATATTCTTTCGGGGCTGGCTTACTTGCATAGCAAGAAAACAATTCATAGGGACATCAAAGGGGCCAACTTGCTTGTTGATTCTTCAGGTGTTGTTAAGCTTGCGGACTTTGGGATGGCCAAGCATTTAACTGGACATGCTGCTGATCTTTCTTTGAAAGGAAGTCCATACTGGATGGCTCCAGAGCTTATGCATGCCGTTATGCAAAAAGATAACAGCTCTGATCTAGCTTTTGCTGTGGATATTTGGAGTTTGGGCTGTACAATTATTGAAATGTTCACGGGGAAGCCTCCTTGGAGTGAGTACGAAGGAGCCGCAGCCATGTTTAAGGTTATGAAGGATACCCCTCCTATACCTGAAACATTGTCACTAGAGGGTAAAGATTTTCTAAGGCTTTGCTTTATAAGAAATCCAGCAGAGCGTCCAAGTGCTTCAATGTTACTAGAGCATCGATTTCTGAAAAACTTACTACCGCCAGATGTTCCATCTTCCTCCCACCTGTATAACGCAACAAACTTGATGGTGATATTAGATAAACCCCTTAGTCCCACACGGTTATCTGAAAACAAACCTGATCAGATTTCTATTCCCAGTGCACATATTGCTAGAGGGAAATTAGCCACTGATAGTTTCTTTCATCTCTGTTGA 2037 0.4688 MRWFPTLIFSHSSSSSSSSSSSASSSSSSPSSSSSPTILKSSPSTSSLPDHRKNTRSTWLFGSGKRSTRSRKLRHVDHDDSEYDAVAAPFSRSPSTRSYIRSNTNTATSSVAPQPLPLPELASPAQHRQRDADCRLPSPKDAASAAPCRGPEPDGAVDASLTTGFRMRSVFARQETRRNTEHVEIRSPGSGMVRQDASGSATSSSARGNNFCISVPARSAPSSPFASPTISPKNTQNDDFVPYYYVSPKGNQFWSAPEMPTSQTLAGQPPPAFFDFSALGTDNASSPHPKSPTKPSSPMPRLSFETSTARRESIAPLTVHPLPLPPWAGSALPSPSATFSQPVARTEPLSMKSQWQKGKLIGRGTFGSVYVATNRETGALCAMKEAEIFSDDPKSAECIKQLEQEIKVLSNLKHPNIVQYFGSEIVEDKFYIYLEYVHPGSINKYVREHCGAITESVVRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSSGVVKLADFGMAKHLTGHAADLSLKGSPYWMAPELMHAVMQKDNSSDLAFAVDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMKDTPPIPETLSLEGKDFLRLCFIRNPAERPSASMLLEHRFLKNLLPPDVPSSSHLYNATNLMVILDKPLSPTRLSENKPDQISIPSAHIARGKLATDSFFHLC. 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02508 678 MobiDBLite consensus disorder prediction 173 208 - -
Seca9g02508 678 Gene3D Transferase(Phosphotransferase) domain 1 351 635 - -
Seca9g02508 678 MobiDBLite consensus disorder prediction 91 113 - -
Seca9g02508 678 SUPERFAMILY Protein kinase-like (PK-like) 338 641 IPR011009 -
Seca9g02508 678 MobiDBLite consensus disorder prediction 1 159 - -
Seca9g02508 678 MobiDBLite consensus disorder prediction 7 65 - -
Seca9g02508 678 SMART serkin_6 355 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02508 678 ProSitePatterns Protein kinases ATP-binding region signature. 361 384 IPR017441 GO:0005524
Seca9g02508 678 MobiDBLite consensus disorder prediction 193 208 - -
Seca9g02508 678 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 14 629 - -
Seca9g02508 678 FunFam Mitogen-activated protein kinase kinase kinase 5 352 652 - -
Seca9g02508 678 Pfam Protein kinase domain 356 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02508 678 ProSiteProfiles Protein kinase domain profile. 355 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02508 678 MobiDBLite consensus disorder prediction 276 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02508 Seca-Chr9 38240382 38244570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02508 1 675 MAP Kinase Kinase Kinase AT5G66850 51.690 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Seca9g02508 Pkinase 1.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02508 - - psat:127120353 912.138