Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02503 ATGACGATCGGAGCGGGCATGGATATGCCTATCATGCACGATAGTGACCGTTATGATTTCGTCCGCGATATCGGGTCTGGGAATTTCGGCGTCGCCAGGCTCATGAGGGACAAACACACCCAAGAGCTTGTTGCTGTCAAGTATATCGATCGTGGAGATAAGATTGATGAAAATGTGAAGAGAGAAATCATTAATCACAGGTCTCTCAGACATCCTAACATTGTCAGGTTTAAGGAGGTCGTCATTTTAACACCTACTCATCTGGCCATTGTAATGGAATATGCATCTGGAGGAGAACTATTTGAGCGGATATCCAAAGCAGGGCGTTTTAATGAGGATGAGACTCGGTTCTTCTTTCAACAACTCATATCTGGGGTCAACTATTGTCATGCAATGGAAGTATGTCATCGGGACCTGAAGTTGGAAAACACTTTGTTGGATGGAAGCCCAACTGTAACGCCCGCGTTTTACCGTTTTTGCCGTTTTTGCAGTTTTGAGTGTTTTATTGGATTTTGA 516 0.4419 MTIGAGMDMPIMHDSDRYDFVRDIGSGNFGVARLMRDKHTQELVAVKYIDRGDKIDENVKREIINHRSLRHPNIVRFKEVVILTPTHLAIVMEYASGGELFERISKAGRFNEDETRFFFQQLISGVNYCHAMEVCHRDLKLENTLLDGSPTVTPAFYRFCRFCSFECFIGF. 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02503 171 PANTHER SERINE/THREONINE KINASE 17 151 - -
Seca9g02503 171 Pfam Protein kinase domain 18 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02503 171 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Seca9g02503 171 FunFam Serine/threonine-protein kinase SRK2E 9 94 - -
Seca9g02503 171 Gene3D Phosphorylase Kinase; domain 1 1 94 - -
Seca9g02503 171 SMART serkin_6 18 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02503 171 SUPERFAMILY Protein kinase-like (PK-like) 16 150 IPR011009 -
Seca9g02503 171 Gene3D Transferase(Phosphotransferase) domain 1 97 164 - -
Seca9g02503 171 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Seca9g02503 171 ProSiteProfiles Protein kinase domain profile. 18 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02503 Seca-Chr9 38167461 38169172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02503 17 147 CBL-interacting serine-threonine protein kinases AT2G26980 44.444 8.62e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Seca9g02503 Pkinase 9.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02503 K14498 - gmx:100804702 280.026