Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02494 ATGTCATTTTCGTTGTTCTCCACGCCTCAGCAACCACAGCAGCAGCTGTTTCAACCGCAGCAGCAGCAGCAGCAGCAGTCTCCCTTTCAGCAGACTAGTCTATTCCTTCCACAGCAGCAGCAGCAACAGCAACAGCAATTTCAAGCACAACAGCAGCAACAACAGCAGCAGCAGCAACAGCAACATCAATTGTTTTTGTTCACTAACGATAGAACTCCCGCCAGTTACAGTACCAATTGGGCGGATCTTCATCCTGATTCCCAGAAGTTTCTCCTTCAGATCGAGGAGCGGATATTGGAGTATAGGGATGAAAGCCAGAGGTTAGATCAGTGTAGTCGTCTTTATGATTCTTCAATTTCAAACGATGGATTTGAGCTTGATGCAAGCCACATTGTTCAGGAACTTGGTGGAATTAGCACTGCTATGGAAAGACAGAAAACTTTGCTGCAGGAACTGATGTCCGTTGTTAAGGATATGTTACACAACACAGAGGTTGCTGTTCGTTCCTTTATGATGCTACGTCCACGGTTCCTTCATCCCAGTGGGGGTGCATCAAGTGCCACAGCCCCGTCACAGACTCCTGGAGCGACTACAAGTACCCAACCAACAAGTACATCTATAGTGCCTGTTTTTGATTTCTACAGTGGTCTTCCAAAGAAACCATCCGCCTTTATACAGCAAACAGTTTTAAGATTTGAGAAGTATCTTGGCGAATGCCATCAGTGGATTGAAGAGTTGGAGCAGCTTCTTTTCTTAGATTCAGAGAGAAACGCTTCTAGTACTGGATCCTCATTATTGCAATCTCTTCCCAAAGTCATGACAAATGTGCATGACTTTTTTGTTCATGTGGCTGCAAAGGTGGAGAGCATTCACCAGTATATTGAATCCATGAAATCAGCATACCTAGCTAATCAGCGCCGCCGGGGGGAGGTGAATGATCCATTTTTAGAGGCCGATCGGCGAGAAACTGCAAGACAAGAAGCTGCCTCAAAAAGAGTTCATCCAACATTGCATTTACCTGCAAATTCACAACCCTCAACTCAAGTTGCTGGGTTGTTTTCCAGTTCAGGAACTCAAGGGGCATTAACTGCCCCACAGACATCTGCGGCAACTTCATCTTCATCATCAGGAAGTGGTTTCTCTCTTTTTAGCACACCGTCTTCTGCTCCATCATCTTCTTTGTTTACAACACCAGCGACTCCTGCTCCAGGATCCTCTTGGTTTGCATCATCTAGTGCTACACCTCAAACCTCAGTTTTTGGTTCTACATCATCATCCTTGCCTGGCGTTGCATCAACTCCCTCCCTGTTCAGTAATACTGCTCCATTGTTCAGTTCAACTCCAGCTGCAGGTTCACTCTTTTCAACTCCATTTGCTTCAGGTGCTGCAACAGGATCAGGGGCAAGCTTTGGGCCTGGATCGAAAAATCCACGGCCAAAATCCAGAACTGCTCGCCGCTAA 1461 0.4627 MSFSLFSTPQQPQQQLFQPQQQQQQQSPFQQTSLFLPQQQQQQQQQFQAQQQQQQQQQQQQHQLFLFTNDRTPASYSTNWADLHPDSQKFLLQIEERILEYRDESQRLDQCSRLYDSSISNDGFELDASHIVQELGGISTAMERQKTLLQELMSVVKDMLHNTEVAVRSFMMLRPRFLHPSGGASSATAPSQTPGATTSTQPTSTSIVPVFDFYSGLPKKPSAFIQQTVLRFEKYLGECHQWIEELEQLLFLDSERNASSTGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYIESMKSAYLANQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQGALTAPQTSAATSSSSSGSGFSLFSTPSSAPSSSLFTTPATPAPGSSWFASSSATPQTSVFGSTSSSLPGVASTPSLFSNTAPLFSSTPAAGSLFSTPFASGAATGSGASFGPGSKNPRPKSRTARR. 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02494 486 MobiDBLite consensus disorder prediction 313 332 - -
Seca9g02494 486 MobiDBLite consensus disorder prediction 462 486 - -
Seca9g02494 486 Gene3D - 220 310 - -
Seca9g02494 486 MobiDBLite consensus disorder prediction 181 203 - -
Seca9g02494 486 MobiDBLite consensus disorder prediction 184 203 - -
Seca9g02494 486 MobiDBLite consensus disorder prediction 1 38 - -
Seca9g02494 486 Coils Coil 486 486 - -
Seca9g02494 486 MobiDBLite consensus disorder prediction 313 382 - -
Seca9g02494 486 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 6 474 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Seca9g02494 486 Coils Coil 40 60 - -
Seca9g02494 486 MobiDBLite consensus disorder prediction 337 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02494 Seca-Chr9 38091792 38096185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02494 64 486 NAC Transcription Factor Family AT4G37130 64.055 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02494 K14307 - gmx:100776992 643.269