Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02459 ATGGAAGCTCAACTTTCCTTCAGTGTTAGTATTACTATAACCTTCTTTCTGCTCTTCTTGTTACATTGGGTTGCAAAATATTACAAGTCTCTTGCTCACAAACTTCCCCCAGGTCCAACCAAGTTACCTCTCATAGGGAACCTGTATCAACTAGCAGTAGCAGGGTCACTTCCTCATCATGCTCTGCGAGAACTTGCCCATAAATATGGACCTCTCATGCACCTTCAACTTGGTGAAATCTCTACAGTGATTGTATCCTCCCCTAAGATAGCCAAGGAGATAATGAAAACCCATGATGTTGCTTTTGCCAATAGGCCACAACTTCTTTCTCCTCAAATTTTAGCCTATGGAGCAACAGATATTGCTTTTTCTCCATATGGTGATTATTGGAGACAAATGAGGAAAATATGTGTGCTAGAGCTTCTTAGTACAAAGAGAGTTCAATCTTTCTCTTATATTAGAGAAGTTGAGACAGCAAAATTCATAAAATCAATTCAGTCATCTGCAGGGTCATTATCACCAATTAATGTTACTAGTAGAATTTTCTCATTGATAAGTTCTATTGTTTCCAGGGCAGCGTTTGGTGACAAATCTCAGGACCAAGATGAATTTGTGTCTTTGATCAGAAAGGCAATTGCACTCACAGGAGGATTTGAGCTCGCTGATGTGTTTCCTTCCATGACACCTATACATATACTAACTGGAGTGAAATCCAAATATGAGAGAATTCACAAGAGGGCAGACAAAATCCTAGAAAACATTATCAAGAAACATCAAGAAAAGCAAACAAGTGCAAAAGAAGCAGAGAAGGAAGATCTTGTTGATGTTCTTTTGAGACTCCAACAAAGTAGTAGCCTTGAGATCCAATTGACAAATAGTAACATCAAAGCTGTGATTTGGGACGTATTTGCCGCTGGAACTGATACGACATCAACAACAATAGAGTGGGCCATGTCAGAAATGATGAGAAACCCAAGAGTGAGAATGAAGGCACAAGATGAACTGAGACAAGCATTGAAAGGAAAGGAAATAATCTCTGAAACTGATGTTGAGGAACTTAGTTACTTAAAGACAGTGATCAAAGAGACATTGAGGTTACACCCTCCTTCTCCTTTGTTGATCCCTAGAGAATGCACTGAGTTAACCAAAATTGAAGGGTTTGAAATACCGGCAAAGACTAAAGTTATTATAAACGCATGGGCAATTGGAAGAGATCCTCAATATTGGAGTGATGCTGAGATGTTTAATCCAGAGAGGTTTGATGGTAGTTTTATGGATTTCAAAGGGAATAACTTTGAGTTTATTCCTTTTGGGGCAGGAAGGAGAATGTGTCCTGGCATGACATTTGGTTTAGCTAGTGTTCTGCTTCCTCTGGCTATGTTACTCTATTACTTTAATTGGGAACTCCCAAATGAGATGAAACCTGAGGATTTGGATATGACTGAACATTTTGGAATGGCAGTTGGAAGGGAAAACGACTTGTGTTTGATTCCCACTGTTTATGATCCTTCACTTCATGATACTCATAGTGTCTGTGGATGA 1542 0.3917 MEAQLSFSVSITITFFLLFLLHWVAKYYKSLAHKLPPGPTKLPLIGNLYQLAVAGSLPHHALRELAHKYGPLMHLQLGEISTVIVSSPKIAKEIMKTHDVAFANRPQLLSPQILAYGATDIAFSPYGDYWRQMRKICVLELLSTKRVQSFSYIREVETAKFIKSIQSSAGSLSPINVTSRIFSLISSIVSRAAFGDKSQDQDEFVSLIRKAIALTGGFELADVFPSMTPIHILTGVKSKYERIHKRADKILENIIKKHQEKQTSAKEAEKEDLVDVLLRLQQSSSLEIQLTNSNIKAVIWDVFAAGTDTTSTTIEWAMSEMMRNPRVRMKAQDELRQALKGKEIISETDVEELSYLKTVIKETLRLHPPSPLLIPRECTELTKIEGFEIPAKTKVIINAWAIGRDPQYWSDAEMFNPERFDGSFMDFKGNNFEFIPFGAGRRMCPGMTFGLASVLLPLAMLLYYFNWELPNEMKPEDLDMTEHFGMAVGRENDLCLIPTVYDPSLHDTHSVCG. 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02459 513 CDD CYP71-like 68 494 - -
Seca9g02459 513 Pfam Cytochrome P450 36 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g02459 513 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g02459 513 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g02459 513 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g02459 513 FunFam Cytochrome P450 71D8 28 498 - -
Seca9g02459 513 Coils Coil 251 271 - -
Seca9g02459 513 SUPERFAMILY Cytochrome P450 36 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g02459 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Seca9g02459 513 Gene3D Cytochrome P450 28 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g02459 513 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g02459 513 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g02459 513 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g02459 513 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g02459 513 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g02459 513 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g02459 513 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g02459 513 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g02459 513 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g02459 513 PANTHER OS08G0105600 PROTEIN 60 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02459 Seca-Chr9 37740762 37743219 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02459 11 503 Cytochrome P450 AT3G26300 43.114 1.14e-143 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02459 - K15472 gmx:100783298 731.865