Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02458 ATGCTCAAAATAAGGGTCCTAATAACAATTATCTACCTTTATCTATTGCAGATTTTGAGGGTCCTAATAACAATTTTGGACACATCAAGTGATCCAAGGACTCTGGCCGTTGCTTGTTTTGATCTTTCACAGTTCATCCAACACCATCCTGCTGGGCGTATCATTGTGACTGACCTTAAAGCCAAGGAACGAGCAATGAAATTAATGAATCACGAGAATGCTGAAGTTACTAAAAATGCGCTCCTCTGCATCCAACGGCTTCTCTTAGGTGCGAAATATGCCAGCTTCCTGCAGGCCTAG 300 0.4233 MLKIRVLITIIYLYLLQILRVLITILDTSSDPRTLAVACFDLSQFIQHHPAGRIIVTDLKAKERAMKLMNHENAEVTKNALLCIQRLLLGAKYASFLQA. 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02458 99 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 45 52 IPR018506 GO:0020037
Seca9g02458 99 Gene3D - 14 91 IPR038497 -
Seca9g02458 99 Pfam V-ATPase subunit H 17 89 IPR011987 GO:0000221|GO:1902600
Seca9g02458 99 SUPERFAMILY ARM repeat 17 89 IPR016024 -
Seca9g02458 99 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 17 98 IPR004908 GO:0000221|GO:0046961|GO:1902600
Seca9g02458 99 Coils Coil 59 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02458 Seca-Chr9 37732361 37732660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02458 16 99 Primary Pumps ATPases(2) AT3G42050 86.905 8.19e-48 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02458 K02144 - twl:119993765 157.918