Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02440 ATGACTGGCTCGTCGGGAAGGTTGCCGACGTGGAAGGAAAGGGAGAACAATAAGAGGAGAGAGAGAAGAAGAAGAGCGATTGCTGCTAAGATCTATGCAGGCCTTCGAGCTCAGGGGAACTACAAGCTTCCCAAGCACTGTGACAACAACGAGGTCTTGAAGGCTCTATGTGCTGAAGCTGGTTGGATCGTAGAAGAAGATGGCACTACCTATCGAAAGCAGGGAGGCAAGAGACCCCAAACTGAGATTGGAGGCACTCCACCAAATATCAGTGCTTGTTCTTCCATTCAACCAAGTCCACAATCCTCGTCATTCCCTAGTCCTGTGCCATCCTACCATGCTAGCCCAACTTCATCTTCTTTCCCCAGCCCCACTCGCATTGATGGAAACCCCTCTTCCTTTCTCCTTCCATTCATCCGCAACATAACTTCCATCCCCACAAATCTCCCACCTCTCAGGATTTCCAACAGTGCCCCTGTAACCCCACCTCTCTCTTCTCCTAGAAGTTCAAAGCGTAAAGCAGACTTTGAATCCCTCTCTAATGGTTCCCTTAACTCCTTCCGCCACCCCATTTTCGCTACTTCTGCCCCATCAAGCCCCTCACGCCGCCACCACGTGGCCACTTCCACCATTCCAGAATGTGATGAGTCAGATGCTTCCACCGTGGACTCTGGTCGCTGGGTTAGCTTTCAGACAGCAACGGCCTCAGCTGCTGCTCCTCCTTCCCCTACCTTTAATCTCATGAAACCAGCAATGCAGAAGATCACTCCCCAGGATTCCATAGACATGAATGAAGGAATGCAATGGGGTTCAGGTGCTGAGATTGGCAGAGGATCAGATTTTGACTTTGAGAATGGCAGAGTGAAGCCGTGGGAGGGTGAGAGAATCCATGAGGTTGGAATGGATGAGTTGGAGCTTACTCTAGGGTGTGGAAAGGCCTGA 942 0.5096 MTGSSGRLPTWKERENNKRRERRRRAIAAKIYAGLRAQGNYKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKQGGKRPQTEIGGTPPNISACSSIQPSPQSSSFPSPVPSYHASPTSSSFPSPTRIDGNPSSFLLPFIRNITSIPTNLPPLRISNSAPVTPPLSSPRSSKRKADFESLSNGSLNSFRHPIFATSAPSSPSRRHHVATSTIPECDESDASTVDSGRWVSFQTATASAAAPPSPTFNLMKPAMQKITPQDSIDMNEGMQWGSGAEIGRGSDFDFENGRVKPWEGERIHEVGMDELELTLGCGKA. 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02440 313 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 4 310 IPR033264 GO:0003700|GO:0006351|GO:0009742
Seca9g02440 313 MobiDBLite consensus disorder prediction 193 220 - -
Seca9g02440 313 MobiDBLite consensus disorder prediction 1 22 - -
Seca9g02440 313 MobiDBLite consensus disorder prediction 149 168 - -
Seca9g02440 313 MobiDBLite consensus disorder prediction 71 126 - -
Seca9g02440 313 MobiDBLite consensus disorder prediction 84 126 - -
Seca9g02440 313 Pfam BES1/BZR1 plant transcription factor, N-terminal 4 129 IPR008540 -
Seca9g02440 313 MobiDBLite consensus disorder prediction 149 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02440 Seca-Chr9 37523717 37525797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02440 7 313 BZR Transcription Factor Family AT1G75080 58.025 2.50e-99 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Seca9g02440 BES1_N 4.6e-61 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02440 K14503 - gmx:100812095 442.195