Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02435 ATGGCACATGAATGTCCACACGTCTTAGACAGAGGCAGTAAGCTCCTCTTCCATCTCTCACTCGCTAATGGGTCCTCATCAGAGGAACCCAGGCTAAGTGACCGCGTTTTCGATGATGGTTTCGTCTTTGATATTGATCGTTCCTTGCTACTCGACCCTCGTAAACTAATCATTGGTGATGTCATTGGAGAAGGCGCTTACTCCATTGTACACACAGGATGGTATGGATGTCGTCCTGTTGCTATAAAGATTATACTCCCAGAAAGAACAGTGAATGCTACACCAGAATGCAAGGCAAAATTTCAGCGGGAGGTGAACTTGATATCTAAGATGCAACATGAAAATATTGTGAAGTTTATTGGCGCCTGTGTGGAACCATCGATGATGATAGTCACAGAACTTTTGGAAAGTGGCTCACTTCAGAAAAATTTAAAGAGCATCTATCCTTGGACTCTTGGTTTGGAACAATCTTTAAGCTTTGCTCTGGATATTTCTCAAGCAATGGAGTATTTGCATGCAAATGGCATTATTCACCGTGATTTGAAGCCTGGTAATTTACTGCTTACAAAGGACAAGATGCATGTTAAACTTGCTGATTTTGGTTTAGCTAGAGAAGATATATGTGATGAGATGACTTGTGAGGCTGGTAGTTACCGATATATGGCTCCTGAGTTATTCAACAAAGATCCACTTCCAAAAGGAACAAAGAAATTCTATGATCGCAAGGCGGATGTCTATAGCTTCGCAATGGTTCTGTGGTCAATAATCAAAAACCAAACTCCATTTAAAGAAAGGAAAGACTTGATGGCTGCATATGCTGCAGTAAACCAGAACTTGAGGCCAAGTGTGGATGAGTTTCCAACACCTGTACTTCCCCTGCTGCAGTCCTGCTGGGCAGAGGACCCAAAACTCCGACCAGAATTCACAGAGATCACTGAAACTCTAGCAGAGCTTCTCCAGAATTTTTGGCCACCAAGGACTACACTTTCCAGCATAACTGAGATTGAAGAAATTGAAAGCAGTGACGATGAAGAAATTCCAAAGGCACATGAATCAAGCCTGGACTCTGGGGAGGAAAACAATATTCCCAAACATCATGATGATGATTATGGGACTAGAAAACCCAATGGTGGAACAGAGAGTGAGTCTCATTCTCAGAGTAGAAGAGCACAGACCCCTTTACCTGCGTCAACCGAAGGCAAGCCAAAAAAGAAAAGCAAGTTCAGGTTTTTATTGTCGTGTTTCCGCAGTTGCCATGCCTTTTGA 1266 0.4273 MAHECPHVLDRGSKLLFHLSLANGSSSEEPRLSDRVFDDGFVFDIDRSLLLDPRKLIIGDVIGEGAYSIVHTGWYGCRPVAIKIILPERTVNATPECKAKFQREVNLISKMQHENIVKFIGACVEPSMMIVTELLESGSLQKNLKSIYPWTLGLEQSLSFALDISQAMEYLHANGIIHRDLKPGNLLLTKDKMHVKLADFGLAREDICDEMTCEAGSYRYMAPELFNKDPLPKGTKKFYDRKADVYSFAMVLWSIIKNQTPFKERKDLMAAYAAVNQNLRPSVDEFPTPVLPLLQSCWAEDPKLRPEFTEITETLAELLQNFWPPRTTLSSITEIEEIESSDDEEIPKAHESSLDSGEENNIPKHHDDDYGTRKPNGGTESESHSQSRRAQTPLPASTEGKPKKKSKFRFLLSCFRSCHAF. 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02435 421 MobiDBLite consensus disorder prediction 337 404 - -
Seca9g02435 421 Gene3D Phosphorylase Kinase; domain 1 44 136 - -
Seca9g02435 421 MobiDBLite consensus disorder prediction 343 375 - -
Seca9g02435 421 ProSiteProfiles Protein kinase domain profile. 56 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02435 421 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 52 319 - -
Seca9g02435 421 ProSitePatterns Protein kinases ATP-binding region signature. 62 83 IPR017441 GO:0005524
Seca9g02435 421 SMART serkin_6 56 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02435 421 Gene3D Transferase(Phosphotransferase) domain 1 137 357 - -
Seca9g02435 421 PRINTS Tyrosine kinase catalytic domain signature 170 188 IPR001245 GO:0004672|GO:0006468
Seca9g02435 421 PRINTS Tyrosine kinase catalytic domain signature 286 308 IPR001245 GO:0004672|GO:0006468
Seca9g02435 421 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Seca9g02435 421 PRINTS Tyrosine kinase catalytic domain signature 132 145 IPR001245 GO:0004672|GO:0006468
Seca9g02435 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Seca9g02435 421 SUPERFAMILY Protein kinase-like (PK-like) 50 333 IPR011009 -
Seca9g02435 421 CDD STKc_MAP3K-like 62 315 - -
Seca9g02435 421 Pfam Protein tyrosine and serine/threonine kinase 58 315 IPR001245 GO:0004672|GO:0006468
Seca9g02435 421 MobiDBLite consensus disorder prediction 376 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02435 Seca-Chr9 37442214 37446392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02435 38 322 MAP Kinase Kinase Kinase AT5G66710 55.944 1.24e-109 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Seca9g02435 PK_Tyr_Ser-Thr 1.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02435 - K04427 gsj:114390113 417.542