Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02433 ATGAGAGTTCCCGTTTCACCATCCCCACAGGCCAACCCAAAACCTAGCAACGCAATCCGTACCATTTCCCTCCACAACAACACAGGCCCGTGTTACGAGCCCACTTCTGTCCTCGACCTCTGCCGGAGCCCGAGCCCCGGTACCGTCCCTGAAAAGCCCACTGATAACTCACTTGTCACCAACTCTCAAGACCAAGAGTGTCTGGAGCTGGACGACCATGCGTTGCATAATTTAGATTGGGATTCCATTATGAAGGACTTGGGCTTGCACGACGAGTCTGGTGCTCCCGTTTTGAAAACCATTCTCCACCCCAACAATCCATGCGATCTCCCTCTTCCTCCCCCTGAATTCACACCCTTCGATCAAGCCACCGCAGAATTCACCGACATGTACTCCAATCTAAACCTTGGTTACAACTACAACTACACCACCATGGACCAGAACGGCTTCGATTTCATCGAAGAGCTTATCCGCGCCGCTGATTGCTTCGACAGCAACCAGCTACAACTTGCGCAGGTGATATTGGAGCGGCTCAATCAACGGCTACGATCTCCCGTGGGAAAACCCCTTCAACGAGCGGCGTTTTACTTCAAAGAAGCTCTCCAGTCCCTTCTCTCCGGTTCGAACCGGACGCCACGGCTTTCTTCCTTGGTGGAAATCGTGCACAGTATCAGAACCTTCAAGGCCTTCTCCGGAATCTCTCCCATTCCAATGTTCTCCATCTTCACCACCAACCAAGCACTCCTCGAAGCGCTTCAGGTTCACGCCTCTTCATTCCTCCACGTCATCGACTTCGATATTGGCCTCGGGATTCAATACGCTTCTCTCATGAAGGAGATTGCGGAGAAGGTAGAGTCCTGCAAAATCGCCTCACCTCTCCTCCGCATCACCGCCGTTGTTCCTGAAGAGTACGCCGTCGAGAGCACGCTCATCCGCGAGAATCTCACTCAGTTCGCTCAGGAACTCAGGATCCGAGTCCAGGTTGAGTTCGTGCTGCTCCGAACCTTCGAGACGCTCTCCTTTAAGGCAATCAAGTTCGTCGACGGAGAAAAGACCGCCGTTCTCTTGTCTCCGGCGATCTTCCGCCGCCTCGTCTCAGCCGCGGCGTTTCTGGCGGACGTGCGGAGTGTCTCTCCATGCGTGGTGGTTTTCGTGGACGGCGAAGGATGGGCGGAGGCCGCGGCGGCGTCGACGTTCAGGCGCGGCGTGGTGAGCAGCCTGGAGTTCTACTCGATGATGCTGGAGTCGCTGGATGCCTCGATCGTGGGAGGAGGAGGTGAATGGGTGAGGAGGATTGAGATGCTGCATCTACGCCCGAAGATAATGGAGGCGGTGGAAGGGACTGGACGGCGAATGCCGCCGTGGAGGGAGGCGTTTTACGGTGCGGGTATGAGGCCGGTACAGTTAAGCCAGTTCGCGGATTTTCAAGCAGAGTGTTTGTTGGCCAAGTCACATATCAGGGGCTTCCACGTGGCCAAGCGTCAGGCTGAGCTGGTGCTCTTCTGGCATGAGCGGGCCATAGTTACCACGTCAGCTTGGCGCGTAATCGGAGAGAACTTTGCTGGTTTTCCAATCAAAGGGTTTGGCAGACCGAATGGTTCTTTCTTTCTATCTTTTATGATTTCTGGCATGGAGTATCTTGATCCAAAAAGTACATATGACAGGTACCTGGACTCCCATTTTTTGAAGATTCAGATTGCAAGAGAAAGAGCCATCCTTGTTGTGTCTTCAAATGAGTTTTTCTTCGGAGCCGTTCCAAGAAAGAGGAATTTGAAGAATTTTCCGGGCCTCAAATACTGGAAGGGAGGGAACGGTGGCTTGGGAATTAGAATGGCTCTCCTCGGATCAAACATAGCAAGCGAGGTTGGACTCCGTTTGCTTCTTTGCCCTGTTGGTTCCAACATTGTAGTTCGGACGGCATGCTGCTCTGTTGGAATTGCTTTGCCTGTGTACTCTACATTCAAGGCAATTGAAAATAAAGATCAAAATGCTCAACATAGGTGTCTGCTCTACTGGGCTGCATACGGCTCATTCAGCCTCATCGAAGTATTCACAGACAAGCTTATTTCTTGGTGTCCTATGTACTATCACTTGAAGTTTGCATTTCTTGTTTGGCTTCAACTTCCACCTACCAATGTAAGTTCAATAAGGCTCAGAATTAGTTCAAAAAACTCTGCAGTTCACCAGTTGTTTGATAAGCCTATTAATATCTTTGCTGAAGTTGAAATTTTCATCATTATTCTGCTCGACATATACATTTTCTTTCTGGGCAAGCATTATGATCTGGACAATGCTATATGGACTACTATTAAGGAGACAAAAGAGACAGCTAATTATGCTAAACCATTGGATTGCATGTGGACTTATGCAGAAAAGTTTAGATATGATACTCTGTACAAATCTAGATGTAAATCAAACCGTTTTGCTGATAGACTACGTGCTTTCAAGCAGGGAGCAAAGCAGTTATATGTGAACCACCTGCGCCCTTTCTTGTTGAGGCATCAAGCGAAAGTTGATCATGTTTTAGGCATTGCCTATTATGAAGTGATCAAACTTGTCAGTTCATATCAAAAAGAGATCCAGTTTGTTAGGAGCATGGTGGTAAAGATAACTGGATCAGGGGATCAAATGTCAAGAGGGGCTACTGAATCAGATAGATCGCTGCAACATAGTCCAGCTGAAGACCATGCGGTGCCTTCTGATGCTGAGCCTGACCAAGACAATAATAGTTAA 2733 0.4925 MRVPVSPSPQANPKPSNAIRTISLHNNTGPCYEPTSVLDLCRSPSPGTVPEKPTDNSLVTNSQDQECLELDDHALHNLDWDSIMKDLGLHDESGAPVLKTILHPNNPCDLPLPPPEFTPFDQATAEFTDMYSNLNLGYNYNYTTMDQNGFDFIEELIRAADCFDSNQLQLAQVILERLNQRLRSPVGKPLQRAAFYFKEALQSLLSGSNRTPRLSSLVEIVHSIRTFKAFSGISPIPMFSIFTTNQALLEALQVHASSFLHVIDFDIGLGIQYASLMKEIAEKVESCKIASPLLRITAVVPEEYAVESTLIRENLTQFAQELRIRVQVEFVLLRTFETLSFKAIKFVDGEKTAVLLSPAIFRRLVSAAAFLADVRSVSPCVVVFVDGEGWAEAAAASTFRRGVVSSLEFYSMMLESLDASIVGGGGEWVRRIEMLHLRPKIMEAVEGTGRRMPPWREAFYGAGMRPVQLSQFADFQAECLLAKSHIRGFHVAKRQAELVLFWHERAIVTTSAWRVIGENFAGFPIKGFGRPNGSFFLSFMISGMEYLDPKSTYDRYLDSHFLKIQIARERAILVVSSNEFFFGAVPRKRNLKNFPGLKYWKGGNGGLGIRMALLGSNIASEVGLRLLLCPVGSNIVVRTACCSVGIALPVYSTFKAIENKDQNAQHRCLLYWAAYGSFSLIEVFTDKLISWCPMYYHLKFAFLVWLQLPPTNVSSIRLRISSKNSAVHQLFDKPINIFAEVEIFIIILLDIYIFFLGKHYDLDNAIWTTIKETKETANYAKPLDCMWTYAEKFRYDTLYKSRCKSNRFADRLRAFKQGAKQLYVNHLRPFLLRHQAKVDHVLGIAYYEVIKLVSSYQKEIQFVRSMVVKITGSGDQMSRGATESDRSLQHSPAEDHAVPSDAEPDQDNNS. 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02433 910 MobiDBLite consensus disorder prediction 888 902 - -
Seca9g02433 910 MobiDBLite consensus disorder prediction 874 910 - -
Seca9g02433 910 Pfam TB2/DP1, HVA22 family 649 715 IPR004345 -
Seca9g02433 910 Pfam GRAS domain family 153 514 IPR005202 -
Seca9g02433 910 ProSiteProfiles GRAS family profile. 143 514 IPR005202 -
Seca9g02433 910 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 151 508 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02433 Seca-Chr9 37419281 37431891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02433 68 514 GRAS Transcription Factor Family AT4G36710 57.692 2.81e-167 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca9g02433 GRAS 2.8e-83 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02433 - - gmx:100807470 722.235