Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02364 ATGGGGCAGAGTTGTTGGGCGAACATGCCTCAGGAGCTACTCCGTGAGGTGCTTCTCCGAATCGAGGCATTGGAGGACACATGGCCGCCGAGGAAGAGCGTGGTGGCGTGTGCCAGAGTGTGCCGGAGCTGGAGGGAGATCACAAAGGACATCATCAAAACACCTGAACTTTCTGCTAAGATAACTTTCCCCATGTTCGTTAAGCAGGTTTGCCCCTCCAAGTCGTAA 228 0.5439 MGQSCWANMPQELLREVLLRIEALEDTWPPRKSVVACARVCRSWREITKDIIKTPELSAKITFPMFVKQVCPSKS. 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02364 75 Gene3D - 2 61 - -
Seca9g02364 75 SUPERFAMILY F-box domain 3 50 IPR036047 GO:0005515
Seca9g02364 75 PANTHER TUBBY-RELATED 2 68 - -
Seca9g02364 75 Pfam F-box domain 6 52 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02364 Seca-Chr9 36608990 36609217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02364 3 75 TUB Transcription Factor Family AT2G47900 65.753 4.90e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02364 K19600 - gmx:100778346 129.413