Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02361 ATGGAGATGTCACCACCAGATAACCGATTTCCTCAGACTCCGCATTCCAGATTCTCAACCAAGAAGGGACGGAGTGGTTATGAACCATCAGACACAGAGACAGAGTGGCAAGAGATTCCACGTCATGAACGAGAAAGAAAGAACTTGAATTTGGGTCCTGAAGGAACAAAGACACTGACTTTAATGAGCAAAAGCCCCATAGCACTTCACAGGAGGTACCCTTCAAGGTTTGAAAATGAAGTCTCACCACCCTCAACAGGTCCACGAAGAAGACACCAGAGCAAGTCACCCTATAGGCTGCACATAGTAGATGATAGTGATGCTTCATCATCATTCATAGCAGGTTCGAACATGCACAGAAATATCAGTCCTTTGCCAAGACCTGACCTTGGAAGAACTGTGTCTCCTTATAACAGAAATCATGAGCAAAGAGCACCTTCTGAGAAGACAAACTACAGGAGAGCAGTGACTGCTCCGCGATTGAGGGAACAACCAAGCAATTATGGGAAAACATTGCAGCAAAATGGGGGGAGAACCAAAGACATGATTCTGAAACAAAGGGAAGCTTCTCCTTTCAAAGCACCTTCAGTGGGAGAAATCAATGAAATGATAGCACAGGTGAAACTATCCACAAATCCCACTAGTGATTATTCATCAGTGCTAGAAAGTACAGAGTCGATTCAACCAGGTGATCTTTTCTTTTCTCGTGAATGCAATGCCTTGCAAGGGAAGAATTCTTCTTTGCAAAAAAGTCTTCAACAATATGGGTATTTTAGCCCAAGGCCTCCACCAGTGACCACTATTAATCCCATGAGAGCTCCCACTGAAAACGGTAGCCTCAATATGAATAATATCCGAGGAACCTCATCCAATAATGTCTTGTCTCGATCAACTACAGGCACAATAAGTAGAAAGGGCAGTGGTACTGGGAAGCCAAGTTCTAGTGCTAGTGTGACAAGCGATGTTAGTGGAAAGACAAGTGAAAGCATGCGGAAATTCATTTCCAACAGAAAAAAGAGCCAGAAAGATGCATGGTTTTCTTGTATGATGAGAACAGGAAACTGTAGGACAACAAGAAAATCACCTGAACGTCGACCAATTGATGAAGCTTCTTTCATTGAAAGGGCAATAGTAGTGGAAAGCCTTCCACAATTCTGGGCAGATAAACATCAACCTGCTTCACTTAATGGCTTCATTTGCAACAAACATGAAGCTCAACTTCTCAAGGAATTAGTGTCTCAGGGCTCTTGTCCTCATATTTTGCTCAAAGGATCAGCTGGTTCCGGGAAAAGAGAACTGGCAATGGCTCTTCTTCGAGAAATATATGGTGATGCATGTTGTAATCCGTCCCATGATTTAAGACATTTCCCTATTCAGGACAAAAGGACAATGAAAGCATCTGTTCCAATAACATCAAGTTCTCATCATATGGAGCTCAATGTAAATTCAGAACCAAATGCTAAGTATGCTTTAATGGGATTAATCAAAGAAATTAGCAATATATATGCGATTACCCCTGAGGTCAGCAACATGAATTTCAAGTCAGATTATAAAGTAATAGTTCTTTATGAGGTTGACAAAGCAGTAGAGAACATCCAGCACATGATCAAATGGATCATAGACCGCTATTCAGATATATGCAAATTAGTACTCTGCTGTGAAGATGATGCAGACATTATTGGACCTGTGAAAAACCGGTTCAAAGTCATCAAAGTTGATGCTCCTCAAACTCACGAAATTACCGAGGTTCTTATTCAGATAGCAAAGAAAGAGGAATTTGATCTACCCATGAATTTTGCTATGAGGATTGCTACTAAAGCTAAGCACAACCTCAGGGAAGCAATCATGGCTCTTGAAGTATGCAAAGCACACAACTATCCATTCTCAGAAGAACAACCAATTCCGGTTGGATGGGAGAATGTTGTAATAGAAGTTGCTGCAGAGATCCTAGCTGATCCATCATTTTCACGCTTACTTTCAATACGAGGGAAATTTCAAATGCTTCTCCTGGATTTTGTCCACCCCAAATTGATTCTCCTGAAACTCGTGGAGCAGCTTCTAAAAAGAATTGAGGCCAGCTTAAAAAGGGAGGTCTACTACTGGCATGCTTATTATGACAGAAGACTCCCCCCAGGAACAACAGCTTTACTAAAATTAGAGGAATTTGTTGCCAAGTTCATGAGCATATGCAGAAAAAGCTCAGGCAATCGGCAATTTGTATAG 2223 0.4148 MEMSPPDNRFPQTPHSRFSTKKGRSGYEPSDTETEWQEIPRHERERKNLNLGPEGTKTLTLMSKSPIALHRRYPSRFENEVSPPSTGPRRRHQSKSPYRLHIVDDSDASSSFIAGSNMHRNISPLPRPDLGRTVSPYNRNHEQRAPSEKTNYRRAVTAPRLREQPSNYGKTLQQNGGRTKDMILKQREASPFKAPSVGEINEMIAQVKLSTNPTSDYSSVLESTESIQPGDLFFSRECNALQGKNSSLQKSLQQYGYFSPRPPPVTTINPMRAPTENGSLNMNNIRGTSSNNVLSRSTTGTISRKGSGTGKPSSSASVTSDVSGKTSESMRKFISNRKKSQKDAWFSCMMRTGNCRTTRKSPERRPIDEASFIERAIVVESLPQFWADKHQPASLNGFICNKHEAQLLKELVSQGSCPHILLKGSAGSGKRELAMALLREIYGDACCNPSHDLRHFPIQDKRTMKASVPITSSSHHMELNVNSEPNAKYALMGLIKEISNIYAITPEVSNMNFKSDYKVIVLYEVDKAVENIQHMIKWIIDRYSDICKLVLCCEDDADIIGPVKNRFKVIKVDAPQTHEITEVLIQIAKKEEFDLPMNFAMRIATKAKHNLREAIMALEVCKAHNYPFSEEQPIPVGWENVVIEVAAEILADPSFSRLLSIRGKFQMLLLDFVHPKLILLKLVEQLLKRIEASLKREVYYWHAYYDRRLPPGTTALLKLEEFVAKFMSICRKSSGNRQFV. 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02361 740 Gene3D - 577 634 - -
Seca9g02361 740 SUPERFAMILY post-AAA+ oligomerization domain-like 637 729 IPR008921 GO:0003677|GO:0006260
Seca9g02361 740 MobiDBLite consensus disorder prediction 21 51 - -
Seca9g02361 740 FunFam Replication factor C subunit 3 637 730 - -
Seca9g02361 740 Gene3D - 637 730 - -
Seca9g02361 740 MobiDBLite consensus disorder prediction 1 96 - -
Seca9g02361 740 FunFam Replication factor C subunit 3 384 575 - -
Seca9g02361 740 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 384 623 IPR027417 -
Seca9g02361 740 Gene3D - 384 575 IPR027417 -
Seca9g02361 740 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 382 719 - -
Seca9g02361 740 MobiDBLite consensus disorder prediction 276 330 - -
Seca9g02361 740 FunFam replication factor C subunit 3 576 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02361 Seca-Chr9 36592800 36597294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02361 385 729 Core DNA Replication Machinery Family AT5G27740 39.080 1.07e-78 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02361 K10756 - gmx:100795321 1096.65