Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02309 ATGATGGAGTCGATGGAGTCATGTGTCCCACCAGGTTTTCGGTTCCACCCAACAGATGAAGAGCTTGTTGGTTATTATCTCAGGAAGAAAGTTGCTTCTCAGAAGATTGACCTTGATGTTATCAGAGAGATCGATCTATATCGTATTGAACCATGGGATCTCCAAGAGAGATGCAGGATTGGGTATGAAGAGCAGAATGAGTGGTATTTCTTCAGCCACAAAGATAAGAAGTATCCAACAGGGACAAGAACTAACAGAGCTACAATGGCTGGGTTCTGGAAGGCAACAGGAAGAGATAAGGCAGTGTATGACAAGATGAAACTAATTGGGATGAGGAAGACACTTGTTTTCTACAAAGGAAGAGCCCCTAATGGACAGAAAACTGACTGGATCATGCATGAGTACAGGCTTGAATCTGATGAAAATGGACCTCCACAGGCAAGCACCAGCTCCATATATATTCTTTTACGCGAGGAAGGATGGGTTGTGTGCAGGGCATTCAAGAAAAGAACCACCAATGGCCAAACGAAGGCTATTGAAGGATGGGATACAAGCTACTTCTATGATGAAGCAAGTGGGGTCAGCTCAGTGGTGGATCCAATTGATCTCATTTCAAGACAGCCTCAAAGCTTTTTAGCTCAAAATTTCTTGTGTAAGCAAGAGATAGAAGCAGACAACTTAAGCATCTGCATGCAACCAGAGCAATTTGTACAGCTTCCTCAGCTAGAAAGCCCTTCTTTGCCACTAGTGAAAAGGCCAAGCACAGTGTCCCTAATATCAGACAATAACGAAGATGATGATCAAAACAGGTTATTATCCAACAACACACAGAAAGTGACTGATTGGAGAGCCCTTGACAAGTTTGTGGCTTCTCAACTGAGTCAAGAAGACAGACTTGAAACTAATGCACTGACAAGCTTTGAAGCTCATACTAGCTCAGACATGGCCTTGCTGCTACTGCAGAATAGTAGGGATGAAGGGAACAAGTTAAGCCCTTTTCTAAATTCAAGCTCAGACTGTGATATTGGGATATGCGTATTTGAAAAATGA 1050 0.4286 MMESMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKMKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENGPPQASTSSIYILLREEGWVVCRAFKKRTTNGQTKAIEGWDTSYFYDEASGVSSVVDPIDLISRQPQSFLAQNFLCKQEIEADNLSICMQPEQFVQLPQLESPSLPLVKRPSTVSLISDNNEDDDQNRLLSNNTQKVTDWRALDKFVASQLSQEDRLETNALTSFEAHTSSDMALLLLQNSRDEGNKLSPFLNSSSDCDIGICVFEK. 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02309 349 Gene3D NAC domain 18 173 IPR036093 GO:0003677|GO:0006355
Seca9g02309 349 ProSiteProfiles NAC domain profile. 9 169 IPR003441 GO:0003677|GO:0006355
Seca9g02309 349 FunFam NAC domain-containing protein 18 173 - -
Seca9g02309 349 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 268 - -
Seca9g02309 349 SUPERFAMILY NAC domain 5 169 IPR036093 GO:0003677|GO:0006355
Seca9g02309 349 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02309 Seca-Chr9 35696331 35705136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02309 2 348 NAC Transcription Factor Family AT2G18060 61.942 4.94e-159 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Seca9g02309 NAM 5.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02309 - - aprc:113869508 625.55