Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02303 ATGAAGTTCCATTTTGGTGATAGAGAAGTTGCCTTTAAGTTCTACAATTGGTATGCTAGAGTGAGAGGTTTCTCAGCACGAAAGAACAAGACTGGAAAGGTGAAGAGTGGGGAGGTTGTGCGACAATCGTTTGTGTGTTGTAGACACGGGACCCATGTACCCACAACTCGTCCCCGTAAGCGGGCAGCCAGGCGGATATTAAGATGTGGCTGTAAAGCACAATGTAAGGTCCATTTCTGCGATCAAACCAACAGATGGCATGTCACTGGGTTGATGGATGATCACAACCATAAGATGTTAGATGAAAGGTTCCAGGGCATGCTACCTTCGCATAGGAAGATGGACAATGATGAAATAAAGGAAATGAAACAGATGAGAGATGTTGGAATTAGCACACCAAGCATATATCAATCGTTTGCTAGTAAAAGTGGTGGCTTTGAAAATGTGGGATTTCATACTTGTGATATGTATAATGAGATAGTAAAGCAGAAGAGGATGCTAAAAAATGATGCTATTGAGGCTCTGGAATACCTTGATGAGCTTGCAAGGGGTGATACTGCAATGTTTTTTAGACACAAAGTTGACGATGAAGGGAGACTTGAACACTTGTTTTGGTGTGATGGGTTAAGCCAGGTGGACTATAAATTTTTTGGTGATGTCCTTGCTTTTGATGCGACATATGGGAAGAAAAAATACTACTGGCCTTTAGTAGTGTTTTCAGGGGTTAACCACCACACGCAGACAACAGTGTTTGCATTTGTTGTAATTTCGAACGAAACGGAAGACACTTACGTGTGGGTCCTTGAACAATTTCTTGCAGCCATGAAAGGTAAGTCTCCTAATTCGGTCATCACTGATGGGGATAGGGCAATGAGGAATGCAATTGTGAAAGTCTTCCCCAATGCAACTCATAGACTTTGTGCATGGCATTTAATGCGTAATGCCACTAGCAACATGGGTAAGGAAGGGTTCACAACAAAATTTTCTAGATGCATGCTGGGAGATTTTGATATTGGTGATTTCAAGTTGAAATGGGACAACATGATTACCGAATATGGAGTAGAGGACAATCGGTGGGTGTTAGAAATGTATGAGAAAAGAAGTATGTGGGCCACCGCCTATATCAGGGGCAAGTTCTTTGCAGGCTTGAGGACGACTTCTCGTTGCGAAGGTTTACATTCCCAATTGAAGAAGTTTGTGAACTATAGAAATAATTTGACAGATTTCTTACGTCGCTTGAATCGGTGTGTTAGCTACATAAGGCAGAAGGAGATGGAGGCTGATTTTTCATGCGCCCATGGTGAACAAGCCTTAGAAACTAGCTATCGTGAGCTTGAGCACTGTGCATCCGAGGTATACACATATAGTGTTTTTGTTCTATTTCGGCGTATTTTATCAATGGCACAAAAGTATAAGGTTGTTGGTTTAAAGAAGTCTCTACTGAGCACCGTCTATTTTGTTAGAAAGCATGTTGATGATGATAAGGATTGGTTTGTTTCTTTCTGTACATCAAACCATGAGATGAAATGTTCATGTAAGAGGTTTGAGTCTTTTGGAATACCTTGTTATCACATTATTGTAGTTATGATTCACTTGGACATTAATGAGTTGCCGAGGTCGTTAGTACTGGATAGGTGGACTAAAAAGGCAAAGGTAGCATTTTGGAGGAGCAACCATTTGAGTCCCAAGTATTTGGACTCATTGGTCAGGGCTAGAAAGCTTGCACTGGAAAAAAGGTGTCAAGAGATGGTTGAGGCTGCGTCCCTTTCACGATTTGGTTTTTATGATACAATGGATAAAGTTGAGAGGCAAACTGAATTTCTGAATAGAAGGAACAACTCAGAAGCTTATGCATGTCTTAATGATGATGGGGCAAATAACTGTATTTTGAGGGACCCTATACGAGTGGGGACCAAAGGTTGTAGTGGTGCGTTGCCTACTTCTGGTGGCCAAAGCAAAAGAAAGCCTGGGTGCAGTACTTGTAAGCGTGAAGGGCATAATCGCACCACCTGCCCATTGAAAAGACGTATGGATAGCATGGCAAGTTCATCGCAAATGGCAGAGGATGTTGCAATGGTGTGTATCTCATTTCAAACATTTTTGTTTTGTCTTGCTTAG 2118 0.4169 MKFHFGDREVAFKFYNWYARVRGFSARKNKTGKVKSGEVVRQSFVCCRHGTHVPTTRPRKRAARRILRCGCKAQCKVHFCDQTNRWHVTGLMDDHNHKMLDERFQGMLPSHRKMDNDEIKEMKQMRDVGISTPSIYQSFASKSGGFENVGFHTCDMYNEIVKQKRMLKNDAIEALEYLDELARGDTAMFFRHKVDDEGRLEHLFWCDGLSQVDYKFFGDVLAFDATYGKKKYYWPLVVFSGVNHHTQTTVFAFVVISNETEDTYVWVLEQFLAAMKGKSPNSVITDGDRAMRNAIVKVFPNATHRLCAWHLMRNATSNMGKEGFTTKFSRCMLGDFDIGDFKLKWDNMITEYGVEDNRWVLEMYEKRSMWATAYIRGKFFAGLRTTSRCEGLHSQLKKFVNYRNNLTDFLRRLNRCVSYIRQKEMEADFSCAHGEQALETSYRELEHCASEVYTYSVFVLFRRILSMAQKYKVVGLKKSLLSTVYFVRKHVDDDKDWFVSFCTSNHEMKCSCKRFESFGIPCYHIIVVMIHLDINELPRSLVLDRWTKKAKVAFWRSNHLSPKYLDSLVRARKLALEKRCQEMVEAASLSRFGFYDTMDKVERQTEFLNRRNNSEAYACLNDDGANNCILRDPIRVGTKGCSGALPTSGGQSKRKPGCSTCKREGHNRTTCPLKRRMDSMASSSQMAEDVAMVCISFQTFLFCLA. 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02303 705 Pfam FAR1 DNA-binding domain 13 100 IPR004330 -
Seca9g02303 705 Pfam MULE transposase domain 220 314 IPR018289 -
Seca9g02303 705 MobiDBLite consensus disorder prediction 645 666 - -
Seca9g02303 705 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 591 IPR031052 GO:0006355
Seca9g02303 705 SMART 26again6 508 535 IPR006564 GO:0008270
Seca9g02303 705 ProSiteProfiles Zinc finger SWIM-type profile. 485 533 IPR007527 GO:0008270
Seca9g02303 705 Pfam SWIM zinc finger 509 532 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02303 Seca-Chr9 35640998 35643115 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g02303 MULE 4.4e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02303 - - tpra:123913749 657.907