Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02300 ATGAGAGTGCTTGAAGCAGTTTATCCTCGTCCTTCTGCCATTCCTCCTAGCCCTTCTGTTTCTTTTGAAGTAGGGGCAGAAGATTATGATGATAATCTCACTCCTCTCATCCCTATCATTCCTATTGAGGAAGAAGAATCCATGGATACTAATGGAGTTGCAGTCACAAAACCTGTGGACATTCCCAACAATTTGCAGTCACAATGCAAAGCCTCCTCTGCTAGTGTCCCCTCATCTGTCTGTGGAAAGCCTGTCCCTGGGATATCTCCTAGTTCGGAGGCAGATTTAGCTGCAGCTTCTACTGTCATAACAGCCATCATGAAAAGTAATGAGCAAGGAAGCTTGATTGATATGGACCTACTACTTAAAATATTTAATGATCCAACAATGATTGGGAAATTAATTAACGAACATAGAACTGCAGCTTCCCCTGTTAGTGCATCCTCAAATAATGTGACTGTACCCACTTCTGAATCAAAATCTGTTACTTTATCAGTTCCATTGTCTAGACCTAAACATGAGGTGGCAGCTTCTGGAACTACACCCATAAGAACAGTAGGTCTGTTACCTGTTTCTGGTCCAAAGCAAGCAACTCCATCAGAATCATTTTTGCCCTCAACACCTGATAAGCAAGTAATTCCATCTGTTTCAGTGTCTGCCTCTACTTTTGATAAGCCAACAACTCTATCACTTCCTTTGTTTAGGCCTGTGTCTGATAAATCAGCAGAAAGTTACTCAGTTACATTGCATCAACCTCCATCTCCATCTCCATCTACTCCTATGCCTCATATGCACAGGCCTGGCAACAAAAATATTCCCCATTTGTCAAATGGAGTGATGCCAACTTTAAATACCCAATCTCCTCAACAAGATACAGTTGTGTCATCTGGGGTAAAGCGAGCAGCATCATTGGCTTTGCCTTCTGGTTCTGTGAATTTGCATGCTGTTGCAAACCAGGTGCTGTCCACTGGTTCTGGTTCTGGTTCAGCATTTGGTGTGAAGGATGCCAACTATTATAAGAACCTTATTAGACAACATGGTGCAGATAAACAAGATGTGCAGGACTCACAAATAGGTATCCGTCATAATAATTTCCAAGATATGAAATCGGTACATAACATCATTAAACCAGAGGAAGTGATATTCAAAACTCAGAAACCTTGCATATACTTTAAAAGCTCAAGAGGGTGCCGAAATGGTTCCAATTGCCCTTATCGGCATGATATGTCGGCTCCATTGGGAACTAGTAATGTCCTAGTGGCCCAAAGTGCAAAAAGAGTGAAACTAGCACCAGAAATTAAGAGTTGGATATAA 1314 0.4163 MRVLEAVYPRPSAIPPSPSVSFEVGAEDYDDNLTPLIPIIPIEEEESMDTNGVAVTKPVDIPNNLQSQCKASSASVPSSVCGKPVPGISPSSEADLAAASTVITAIMKSNEQGSLIDMDLLLKIFNDPTMIGKLINEHRTAASPVSASSNNVTVPTSESKSVTLSVPLSRPKHEVAASGTTPIRTVGLLPVSGPKQATPSESFLPSTPDKQVIPSVSVSASTFDKPTTLSLPLFRPVSDKSAESYSVTLHQPPSPSPSTPMPHMHRPGNKNIPHLSNGVMPTLNTQSPQQDTVVSSGVKRAASLALPSGSVNLHAVANQVLSTGSGSGSAFGVKDANYYKNLIRQHGADKQDVQDSQIGIRHNNFQDMKSVHNIIKPEEVIFKTQKPCIYFKSSRGCRNGSNCPYRHDMSAPLGTSNVLVAQSAKRVKLAPEIKSWI. 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02300 437 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 430 - -
Seca9g02300 437 ProSiteProfiles Zinc finger C3H1-type profile. 382 410 IPR000571 GO:0046872
Seca9g02300 437 MobiDBLite consensus disorder prediction 244 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02300 Seca-Chr9 35619669 35626382 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Seca9g02300 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02300 - - gmx:102661587 394.43