Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02283 ATGATCTCCTCCGTATCTTTTTCTTCTTCTATCTCCGCCGCTAACCTCACCGGAAACTCCGTGGCTCCTCCGCCGTGCCGCGTCAGATCTCGACCAATAGTTGCCTTCGCCACCGCTACCGCCACCGCCGAAGCCCGCTCTACCTGGACGGAGCAACCTAGAACTTCCTATCTGAACTCTTCCTGCACATCGCTCTATGAGATCCTAGGTATTCCCGCCGGCGCCTCTAATCAGGAAATCAAGGCAGCGTACCGGCGACTAGCCAGGGTCTGCCACCCAGACGTGGCGGCGATCGACCGGAAAAACTCGTCGGCGGATGAGTTCATGAAGATTCACGCCGCGTACTCCACACTCTCGGATCCTGACAAGCGCGCCAGTTATGATCGGAGCCTCTTCCGGCGACAGCGGCCGTTGTCGACGGCGTCGATATTTTCCGGCTACTCGAGTCGGAACTGGGAGACGGACCAGTGCTGGTAG 477 0.587 MISSVSFSSSISAANLTGNSVAPPPCRVRSRPIVAFATATATAEARSTWTEQPRTSYLNSSCTSLYEILGIPAGASNQEIKAAYRRLARVCHPDVAAIDRKNSSADEFMKIHAAYSTLSDPDKRASYDRSLFRRQRPLSTASIFSGYSSRNWETDQCW. 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02283 158 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 15 158 - -
Seca9g02283 158 CDD DnaJ 66 120 IPR001623 -
Seca9g02283 158 ProSiteProfiles dnaJ domain profile. 64 131 IPR001623 -
Seca9g02283 158 PRINTS DnaJ domain signature 66 84 IPR001623 -
Seca9g02283 158 PRINTS DnaJ domain signature 103 123 IPR001623 -
Seca9g02283 158 PRINTS DnaJ domain signature 84 99 IPR001623 -
Seca9g02283 158 SMART dnaj_3 63 123 IPR001623 -
Seca9g02283 158 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Seca9g02283 158 SUPERFAMILY Chaperone J-domain 60 138 IPR036869 -
Seca9g02283 158 Gene3D DnaJ domain 53 148 IPR036869 -
Seca9g02283 158 Pfam DnaJ domain 65 128 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02283 Seca-Chr9 35389770 35390246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02283 66 128 C2H2 Transcription Factor Family AT1G74250 43.284 1.70e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02283 - - gmx:100800959 267.314