LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca9g02254	ATGAAACTTCCTCCTATTATATCTTTTGTCTATCTTGGCCTAATTTTGTTTTATGCAAATGTCATTGTTGTTTTCCATTCCGTTGTTGTAACAGCCACATCACAGCCCAACAATATAAACATTACAGTTCCTGCTGTAATTGCTTTTGGTGATTCAATCTTAGATCCTGGAAACAATGACTTCATCATCACAAAAGTGAAGGCAAATTTTAAACCATATGGGAGAGGTTTCATTGAGGGAAAATCCACAGGGAGATTTAGTAATTGTAAAATCCTCTCAGATTTCTTCGCTGAAAATGTGGGTGTGAAGGAGCTCTTGCCACCTTATCTTGATCCAAATTTACAGCTTCACGAACTCTTAACTTGTGTGAGTTTTGCCTCTGCTGGTGGAGGATATGATCATGTTACAAACATCATAGCAGTAGTCCTCACTCCACTCCTTTAA	444	0.3784	MKLPPIISFVYLGLILFYANVIVVFHSVVVTATSQPNNINITVPAVIAFGDSILDPGNNDFIITKVKANFKPYGRGFIEGKSTGRFSNCKILSDFFAENVGVKELLPPYLDPNLQLHELLTCVSFASAGGGYDHVTNIIAVVLTPLL.	148

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca9g02254	147	Pfam	GDSL-like Lipase/Acylhydrolase	46	132	IPR001087	GO:0016788
	Seca9g02254	147	Gene3D	SGNH hydrolase	36	146	IPR036514	-
	Seca9g02254	147	PANTHER	GDSL ESTERASE/LIPASE EXL3	24	141	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca9g02254	Seca-Chr9	35148346	35148915	Dispersed/Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca9g02254	21	145	Pollen Coat Proteome	AT1G75910	44.000	3.22e-28	104

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca9g02254	-		-	gmx:100797172	159.844

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