Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02251 ATGAAACTTCCTCCTATTATATCTTTTGTCTTTCTTGGCCTAGTTTTGTTTTATGCAAATGTCATTGTTGTTTTCCATTCCATTGTTGTAACAGCTACATCACAGCCTAACAATATAAACATTACAGTTCCTGCTGTAATTGCTTTTGGTGATTCAATCTTAGATCCTGGAAACAATGACTACACCATCACAAAAGTGAAGGCAAATTTTAAACCATATGGGAGAGATTTCTTTGAGGGAAAACCCACGGGTAGATTCAGTAATGGAAAAATCCTCTCAAACTTCTTCGGTAATAATTCTCTAAGTTGTGACCAAAACTTATTAAACCAAACGGAGCTCTTGCCACCTTATCTTGATCCAAATTTGCAGCTTCAAGAACTCTTAACTGGTGTGAGTTTTGCCTCTGCTGGTGCAGGATATGATCATGTTACAAACATCATAGCAGTAATCCTCACTCCACTCCGTTATATGCCTTGA 477 0.3732 MKLPPIISFVFLGLVLFYANVIVVFHSIVVTATSQPNNINITVPAVIAFGDSILDPGNNDYTITKVKANFKPYGRDFFEGKPTGRFSNGKILSNFFGNNSLSCDQNLLNQTELLPPYLDPNLQLQELLTGVSFASAGAGYDHVTNIIAVILTPLRYMP. 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02251 158 Pfam GDSL-like Lipase/Acylhydrolase 46 143 IPR001087 GO:0016788
Seca9g02251 158 Gene3D SGNH hydrolase 36 156 IPR036514 -
Seca9g02251 158 PANTHER GDSL ESTERASE/LIPASE EXL3 21 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02251 Seca-Chr9 35139774 35140354 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02251 21 153 Pollen Coat Proteome AT1G75910 39.098 1.02e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02251 - - gmx:100797172 151.369