Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02246 ATGAAACTTCCTCCTATTATATCTTTTGTCTATCTTGGCCTAATTTTGTTTTATGCAAATGTCATTGTTGTTTTCCATTCCGTTGTTGTAACAGCCACATCACAGCCCAACAATATAAACATTACAGTTCCTGTTGTAATTGCTTTTGGTGATTCAATCTTAGATCCTGGAAACAATGACTACATCATCACAAAAGTGAAGGCAAATTTTAAACCATATGGGAGAGATTTCTTTGAGGGAAAATCCACGGGTAGATTCAGTAATGGAAAAATCCTCTCAGACTTCTTCGTTAAAAATGCGGGTGTGAAGGAGCTCTTGCCACCTTATCTTGATCCAAATTTGCAGCTTCAAGAACTCTTAACTGGTGTGAGTTTTGCCTCTGCTGGTGCAGGATATGATCATGTTACAAACACCATAGCATCAGTACTGTCATTAGAGGATCAACTAGAGATGTTCAAAGATTACATTGAAAAGTTGAAGGTAGCTGTAGGGGAAGAAAAGACAGCTCTTGTTTTAGCAAAAAGCATATTCCTCCTTAGCATGGGATCGAATGACGTGTCAGAGAGATATTCCGTGACTGCATTCAGGAGATTTCACTATGATATCAATGAGTATACAAGTATGATGGTCAATGAGTCATCAAAATTTCAAAAGGAACTTTATCAATTGGGTGCAAGAAGGATTGGAGTGTTCAGCTTAAACCCAGTAGGGTGTTCACCACTACAAAGGACAGTAAATGGAGGCATAGAAAGAGTGTGTGCAGAATCAGTAAACCAAGCAGCCATGATCTTTAACTCTAAGCTTTCTTCTGCAATGAAGGATCTCAACAAACAACTTCCAGAAGCAAGGCTTGTCTATCTTGACATCTACTTTGAAACTCTTCCATATATCCAAAGCCCCTCTGTTGTAACAGCTACATCACAGCCTAACAATATAAACATTACAGTTCCTGCTGTAATTGCTTTTGGTGATTCAATCTTAGATCCTGGAAACAATTACTACATCATCACAAAAGTGAAGGCAAATTTTAAACCATACGGGAGAGATTTCTTTGAGGGAAAACCCACGGGTAGATTCAGTAATGGCAAAATCCTCTCAGACTTCTTCGTTAAAAATGCGGGCGTGAAGGAGCTCTTGCCATCTTATCTTGATCCAAATTTACAGCTTCAAGAACTCTTAACTGGTGTGAGTTTTGCCTCTACTGGTGCAGGATATGATCATGTTACAAACATCATAGCGTCAGTACTGTCATTAGATGACCAACTAGAGATGTTCAAAGATTACATTGAAAAGTTGAAGGTAGCTGTTGGGGAAGAAAAGACAGCTCTTGTTTTAGCAAAAAGCATATTCCTCCTTAGCATGAGATCGAATGACGTGTCAGAGAGATATTCCGTGACTGCATTTAGGAGATTTCACTATGATATCAATGAGTATACAAGTATGATGGTCAATGAGTCATCAAAATATGCTAATATATACTAA 1482 0.3826 MKLPPIISFVYLGLILFYANVIVVFHSVVVTATSQPNNINITVPVVIAFGDSILDPGNNDYIITKVKANFKPYGRDFFEGKSTGRFSNGKILSDFFVKNAGVKELLPPYLDPNLQLQELLTGVSFASAGAGYDHVTNTIASVLSLEDQLEMFKDYIEKLKVAVGEEKTALVLAKSIFLLSMGSNDVSERYSVTAFRRFHYDINEYTSMMVNESSKFQKELYQLGARRIGVFSLNPVGCSPLQRTVNGGIERVCAESVNQAAMIFNSKLSSAMKDLNKQLPEARLVYLDIYFETLPYIQSPSVVTATSQPNNINITVPAVIAFGDSILDPGNNYYIITKVKANFKPYGRDFFEGKPTGRFSNGKILSDFFVKNAGVKELLPSYLDPNLQLQELLTGVSFASTGAGYDHVTNIIASVLSLDDQLEMFKDYIEKLKVAVGEEKTALVLAKSIFLLSMRSNDVSERYSVTAFRRFHYDINEYTSMMVNESSKYANIY. 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02246 493 Gene3D SGNH hydrolase 313 487 IPR036514 -
Seca9g02246 493 Gene3D SGNH hydrolase 40 312 IPR036514 -
Seca9g02246 493 PANTHER GDSL ESTERASE/LIPASE EXL3 25 302 - -
Seca9g02246 493 FunFam GDSL esterase/lipase APG 308 493 - -
Seca9g02246 493 CDD SGNH_plant_lipase_like 44 301 IPR035669 -
Seca9g02246 493 FunFam GDSL esterase/lipase APG 34 307 - -
Seca9g02246 493 Pfam GDSL-like Lipase/Acylhydrolase 319 464 IPR001087 GO:0016788
Seca9g02246 493 Pfam GDSL-like Lipase/Acylhydrolase 46 292 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02246 Seca-Chr9 35096787 35105553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02246 312 489 Pollen Coat Proteome AT1G75910 39.779 6.31e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02246 - - gmx:100797172 358.992