Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02237 ATGGAAGAGGTATGGAAAGACATCAATCTTGCTTCCTTGAATGACCAAAACAGTAGCCGAAGAACAAGCCGTTCCACCTTTGGAGGTGTAATCTTACAAGATTTTCTTGCACGACCATTTGGAATAGACACACCAAACAGCATGGTCTCTTCTTCTTCTGTTGCCTCAGAAAACAGTGCTTCTTCTTCTCTTTACTGCCCTGCTTCCCCTGCCCCACCTCTTGTCACTGCTCTCAGCTTAAGCTCTCGCCCTGATCATCATCATTTCCATTTTGATCCAAAGGGTAGTGTCCCTAATACTTCTTCCCATTTAGTTCAGCAACCCCACCACACTGCACCCTCAAAAGTTTCTTGTTTTACCAACCCAACAGCACTATTTGAAAGCCTTGCTTCTTCGCCCTGTTTTGGAAACAAAAGGTTCGCTGAACCTGCTGATTGTAACACTGGTGACAGGCGAAATAAGCGTATGATCAAGAATCGTGAGTCTGCTGCACGATCACGAGCTAGAAAACAGGAAAAGATTGGGTGTGTCTGTTTTTGGTTTCTTCAGGCTTACACGAATGAGCTTGAGGAAAAAGTTGATGTCTTGACCGAAGAGAATACAAGACTCAAGAGACAGATAGAAGAGTTGTGGGAAGCAGCAGAAGGTCCACAAAAGAGGAAGAGTAGCCTATATAGAACATTAACAGCTCCATTTTGA 699 0.4406 MEEVWKDINLASLNDQNSSRRTSRSTFGGVILQDFLARPFGIDTPNSMVSSSSVASENSASSSLYCPASPAPPLVTALSLSSRPDHHHFHFDPKGSVPNTSSHLVQQPHHTAPSKVSCFTNPTALFESLASSPCFGNKRFAEPADCNTGDRRNKRMIKNRESAARSRARKQEKIGCVCFWFLQAYTNELEEKVDVLTEENTRLKRQIEELWEAAEGPQKRKSSLYRTLTAPF. 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02237 232 SMART brlzneu 147 230 IPR004827 GO:0003700|GO:0006355
Seca9g02237 232 MobiDBLite consensus disorder prediction 86 109 - -
Seca9g02237 232 SUPERFAMILY Leucine zipper domain 151 212 IPR046347 GO:0003700|GO:0006355
Seca9g02237 232 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 154 169 IPR004827 GO:0003700|GO:0006355
Seca9g02237 232 Gene3D - 150 215 - -
Seca9g02237 232 MobiDBLite consensus disorder prediction 95 109 - -
Seca9g02237 232 Coils Coil 186 213 - -
Seca9g02237 232 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 231 IPR043452 GO:0003700|GO:0045893
Seca9g02237 232 Pfam bZIP transcription factor 151 175 IPR004827 GO:0003700|GO:0006355
Seca9g02237 232 CDD bZIP_plant_BZIP46 151 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02237 Seca-Chr9 35013699 35014638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02237 1 172 bZIP Transcription Factor Family AT4G35900 38.172 1.12e-19 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca9g02237 bZIP_1 8.3e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02237 K14432 - gmx:102660922 187.193