Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02234 ATGGCTTCGATTTTTAGTTACAACCATGGTTCTATGTGTGTAACGGTGGTGTTGGTGTTGTTGATGAGTTTAGCTTCACAGAGGTGTCATGGTCTTCATTCATTTGGGTTTGACATTCACCATCGATTTTCGGATCCGGTGAAAGGGGTTTTGGGCATTGATGAGCTACCCGACAAGGGAACTCGTGAATACTATGTTGCTATGGCCAACAGAGATCGAATATTCCGGGGACGGGGTCTCGCCGGCGATCATCAAACGCCGTTAACTTTTGTCCCTGATAACGAGACCTATCAGATTGGTCTATTTGGATTCTTGCATTTTGCCAATGTTTCTGTTGGGACACCAGCTTCATCGTTTCTTGTAGCATTGGATACCGGGAGTGACTTGTTCTGGTTACCTTGCAATTGTACCAAATGTGTTCATGCTATAAAGTTTTCAACCGGACAGTCGATTGATTTTAATATCTATGATATCAAAGGATCATCCACGAGTCAAAATGTTTTGTGCAATAGCAGCTTATGTGAGCATCAGAGTGAATGCCTTTCATCTGGTGGCTTTTGTCCATATCAAGTTAACTATCTATCTAATGGTACTTCAACTACTGGCTTCTTGGTAGAGGATGTGTTGCACTTAATTACAGATGATGCTCAAACAAAAAAATCTGACACACGAGTTACTTTTGGCTGTGGCCAAGTTCAGACTGGTGCATTTTTGGAGGGGGCAGCTCCAAATGGTCTGTTTGGACTAGGCATGGGTAATGAATCTGTCCCAAGTGTCTTAGCCAATCAAGGGCTTACTTCAAATTCTTTTTCAATGTGTTTTGGATTGGATGGTTCTGGAAGAATCACATTTGGGGATGATAGCAGCTTGGTCCAAGGAAAAACACCATTCAACCTAAGGCCATTGCATTCAACCTACAATGTCACCATTACCCAAATTATTGCGGGAGGAAATGCTGCTGATGTTGAGTTCCATGCAATATTTGACTCTGGTACCTCATTTACATCCCTAAATGACCCGGCTTATACGCAGATTACTCGTGGTCAATTAAACTACAACGGCATTCATTCATCTTCTGATGGTGATCTTCCCTTCGAGTACTGTTATGACTTAAGTACTAACCAGACTGTTGAAGTTCCCATTAATTTGACAATGAAAGAGAACTTCATGACTGGTTACCGCATAGTCTTTGACCGCGAGAACATGATTCTGGGTTGGAAGGAATCTAACTGTTATGATGATGAACTCTCCAATTTACCTACTAACCGAACACAAGCCCCTGCTGTTTCTCCTGCTATGGCTGTGAATCCCCAATCAACATCAAACCAATCTAATGATTCACTGCGACCTAATCCTTCACTACAAATCTTCACAGTTTCTACTGGCAAGTCACTGAGCTTAAACTACTATGAAAAGACATGCCCTGAATTGGAGTTCATTGTTGCCAAGGCAGTGAAGGATGCCAGTGCTAGGGACAAAACTGTTCCTGCAGCACTTCTGCGAATGCACTTCCATGACTGTTTCATTCGGGGGTGTGATGCCTCTGTGCTGCTAAATTCAAAAGGAAACAACAAGGCAGAAAAAGATGGACCACCAAATGTTTCTTTGCATGCATTCTATGTCATTAATGCAGCAAAGAAAGCAGTAGAAGCTTCATGCCCTGGTGTAGTCTCTTGTGCTGATATCCTTGCTCTATCAGCAAGGGACGCAGTTTTTCTGTCTGGAGGACCTACATGGGATGTTCCTAAAGGAAGAAAGGACGGAAGAAAATCTAAGGCCAGTGAAACCATACAATTACCAGCGCCAACCTTCAACATATCACAACTGCAGAAGAGCTTCTCTCAAAGAGGATTGTCAATGGAAGACCTGGTAGCTCTGTCAGGAGGTCATACTTTAGGCTTTTCTCACTGCTCATCTTTCCGGAACAGAATCCACAACTTTGACACTACACATGATGTGGACCCTTCATTGAATCCATCATTTGCAGCAAAACTAAAATCAATTTGTCCACTAAAAAATCAGGCAAAAAATGCAGGCACTATTATGGACCCTTCTTCAACAACTTTCGATAATACGTATTACAAGTTGATCCTCCAACGGAAAGGGCTGTTTTCTTCTGATCAAGCTTTGCTTGATAACCCAAACACCAAGCGTCTGGTTTATAAGTTTGCCAACTCACAAAAGGCTTTCTATGAGGCTTTTGCGAAGTCCATGATCAAAATGAGTAGCATCAATGGTGGGCAAGAGGTCAGGAAAGACTGCAGAGTGGTCAATTAG 2277 0.4251 MASIFSYNHGSMCVTVVLVLLMSLASQRCHGLHSFGFDIHHRFSDPVKGVLGIDELPDKGTREYYVAMANRDRIFRGRGLAGDHQTPLTFVPDNETYQIGLFGFLHFANVSVGTPASSFLVALDTGSDLFWLPCNCTKCVHAIKFSTGQSIDFNIYDIKGSSTSQNVLCNSSLCEHQSECLSSGGFCPYQVNYLSNGTSTTGFLVEDVLHLITDDAQTKKSDTRVTFGCGQVQTGAFLEGAAPNGLFGLGMGNESVPSVLANQGLTSNSFSMCFGLDGSGRITFGDDSSLVQGKTPFNLRPLHSTYNVTITQIIAGGNAADVEFHAIFDSGTSFTSLNDPAYTQITRGQLNYNGIHSSSDGDLPFEYCYDLSTNQTVEVPINLTMKENFMTGYRIVFDRENMILGWKESNCYDDELSNLPTNRTQAPAVSPAMAVNPQSTSNQSNDSLRPNPSLQIFTVSTGKSLSLNYYEKTCPELEFIVAKAVKDASARDKTVPAALLRMHFHDCFIRGCDASVLLNSKGNNKAEKDGPPNVSLHAFYVINAAKKAVEASCPGVVSCADILALSARDAVFLSGGPTWDVPKGRKDGRKSKASETIQLPAPTFNISQLQKSFSQRGLSMEDLVALSGGHTLGFSHCSSFRNRIHNFDTTHDVDPSLNPSFAAKLKSICPLKNQAKNAGTIMDPSSTTFDNTYYKLILQRKGLFSSDQALLDNPNTKRLVYKFANSQKAFYEAFAKSMIKMSSINGGQEVRKDCRVVN. 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02234 758 Gene3D Acid Proteases 92 286 IPR021109 -
Seca9g02234 758 FunFam Peroxidase 600 741 - -
Seca9g02234 758 SUPERFAMILY Acid proteases 101 412 IPR021109 -
Seca9g02234 758 Gene3D - 468 758 - -
Seca9g02234 758 PRINTS Haem peroxidase superfamily signature 622 637 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g02234 758 PRINTS Haem peroxidase superfamily signature 557 574 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g02234 758 PRINTS Haem peroxidase superfamily signature 496 510 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g02234 758 PRINTS Haem peroxidase superfamily signature 575 587 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g02234 758 PRINTS Haem peroxidase superfamily signature 682 697 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g02234 758 Pfam Peroxidase 482 726 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g02234 758 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 121 132 IPR001969 GO:0004190|GO:0006508
Seca9g02234 758 ProSitePatterns Peroxidases proximal heme-ligand signature. 622 632 IPR019793 -
Seca9g02234 758 SUPERFAMILY Heme-dependent peroxidases 465 758 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca9g02234 758 ProSiteProfiles Peptidase family A1 domain profile. 106 451 IPR033121 -
Seca9g02234 758 CDD secretory_peroxidase 465 757 IPR033905 GO:0004601|GO:0042744
Seca9g02234 758 Gene3D Acid Proteases 291 388 IPR021109 -
Seca9g02234 758 PANTHER PEROXIDASE 25-RELATED 459 746 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g02234 758 Gene3D Peroxidase, domain 2 600 741 - -
Seca9g02234 758 PRINTS Plant peroxidase signature 474 493 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g02234 758 PRINTS Plant peroxidase signature 575 590 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g02234 758 PRINTS Plant peroxidase signature 621 633 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g02234 758 PRINTS Plant peroxidase signature 498 518 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g02234 758 PRINTS Plant peroxidase signature 556 566 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g02234 758 PRINTS Plant peroxidase signature 537 550 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g02234 758 PRINTS Plant peroxidase signature 736 749 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g02234 758 PRINTS Plant peroxidase signature 696 713 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g02234 758 PRINTS Plant peroxidase signature 680 695 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g02234 758 FunFam Aspartyl protease family protein 1 93 286 - -
Seca9g02234 758 FunFam Peroxidase 468 611 - -
Seca9g02234 758 ProSiteProfiles Plant heme peroxidase family profile. 464 758 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g02234 758 Pfam Xylanase inhibitor N-terminal 107 286 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02234 Seca-Chr9 34953119 34966119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02234 456 757 Peroxidase AT5G42180 69.408 1.85e-150 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02234 - - gmx:547874 684.871