Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02223 ATGTACAAAGAATCTGATTGCATCAGCTCAAGGACGCTTCACGGTGGCTCTTCTCTCGCGTGCGGCTTGCTTCTCTTCTCTCCACTTTCTGCTCATCAAAGACTCATTGATCATCAATTCTATGTTTTCTGTATACAGAGCCAGACAATGCAAATGATGTACGATGTTGTTGCTAGAGAATTGAAATCAATGCAACTTGATGATGTACACCCACAAGATTACCTCAACTTCTATTGCCTTGGTAATCGGGAACAGTTTAATGAAGAAAGCTCAAGCTCAAATGGTGCACCGGTCTCTGGAGCATATAAATATCGCCGATTTATGATTTATGTGCATGCCAAGGGGATGATCATTGATGATGAGTATGTTATAGTGGGGTCTGCTAATATAAACCAAAGATCTATGGCTGGTACTAAAGATACTGAGATAGCTATGGGTGCGTATCAACCCCATTACACATGGTCTGCCAGGAAAAGACATCCACGTGGCCAGGTTTATGGTTACAGAATGTCACTTTGGGGAGAACATCTTGGCATGTTAGAAGAAACTTTTGAGGAACCACAGACATTGGAGTGTGTGCGTAAAGTGAATGCAATTGCAGACAGTAATTGGAGTAAATTCGCTTCTGAAGATTTCTCACTGTTGCAGGGACATCTTCTTAAGTATCCTGTACAGGTAGATTCAGATGGGAAGATCAGCTCCCTACCTGGATGTGAGAATTTCCCAGATGCTGGAGGTAAGATATTGGGGAGTCACTCCACAACAATTCCAGATATCCTAACAACATAA 789 0.4221 MYKESDCISSRTLHGGSSLACGLLLFSPLSAHQRLIDHQFYVFCIQSQTMQMMYDVVARELKSMQLDDVHPQDYLNFYCLGNREQFNEESSSSNGAPVSGAYKYRRFMIYVHAKGMIIDDEYVIVGSANINQRSMAGTKDTEIAMGAYQPHYTWSARKRHPRGQVYGYRMSLWGEHLGMLEETFEEPQTLECVRKVNAIADSNWSKFASEDFSLLQGHLLKYPVQVDSDGKISSLPGCENFPDAGGKILGSHSTTIPDILTT. 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02223 262 SMART pld_4 107 134 IPR001736 GO:0003824
Seca9g02223 262 SUPERFAMILY Phospholipase D/nuclease 97 191 - -
Seca9g02223 262 Gene3D Endonuclease Chain A 43 158 - -
Seca9g02223 262 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 107 134 IPR001736 GO:0003824
Seca9g02223 262 PANTHER PHOSPHOLIPASE D 44 253 IPR015679 -
Seca9g02223 262 Pfam Phospholipase D Active site motif 108 134 IPR001736 GO:0003824
Seca9g02223 262 Pfam Phospholipase D C terminal 181 251 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02223 Seca-Chr9 34817850 34820005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02223 46 251 Phospholipase D Gene Family (Wang group) AT4G00240 57.746 3.29e-86 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02223 K01115 - gmx:100801787 408.683