Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02216 ATGAAAGCAATGATAGCAACGTCGTTCGATTTCTCCGCCGTCTGCTTCCATTCATGCTCTCCAAATCCACGCCAGAGCAGGAGATGGAGCAGCTATTCGTTTCTAAAATCCCCCAACTCTCACAACGGACGGAGAAGCGTCACTGTTCAACCCAACTCTCCAAACTTCCGAATGGAAACTGCTCTGAAGGGGAACTTGGAGACTATTGGAGTCCCAACTTCGGTACCAGTGCGTGTAGCGCATGAGCTTCTTCTAGCTGGGCATAAGTATTTGGATGTGAGGACCCCAGAAGAGTTCAATGCTGGACACGCTCCTGGCGCAATTAACATACCTTACATGTTCAGAGTTGGATCAGGGATGACAAAGAACAGCAACTTTGTTAAAGAGGTCTCCTCACATTTTAGGAAAGATGATGAAATTATTGTTGGTTGTCAGCTCGGTAAAAGGTCTATGATGGCTGCTAGTGACTTGTTAGCTGCTGGGTTCACTGGAATCACAGACATAGCTGGTGGTTATGCTGCTTGGACCCAAAATGGACTTCCAACAGAATAG 552 0.4692 MKAMIATSFDFSAVCFHSCSPNPRQSRRWSSYSFLKSPNSHNGRRSVTVQPNSPNFRMETALKGNLETIGVPTSVPVRVAHELLLAGHKYLDVRTPEEFNAGHAPGAINIPYMFRVGSGMTKNSNFVKEVSSHFRKDDEIIVGCQLGKRSMMAASDLLAAGFTGITDIAGGYAAWTQNGLPTE. 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02216 183 SMART rhod_4 74 181 IPR001763 -
Seca9g02216 183 CDD RHOD 91 175 - -
Seca9g02216 183 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 70 182 IPR036873 -
Seca9g02216 183 ProSiteProfiles Rhodanese domain profile. 84 183 IPR001763 -
Seca9g02216 183 Pfam Rhodanese-like domain 90 177 IPR001763 -
Seca9g02216 183 Gene3D - 62 183 IPR036873 -
Seca9g02216 183 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 7 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02216 Seca-Chr9 34754397 34758036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02216 74 181 Sulfurtransferasese or Rhodanese AT5G66170 46.364 8.29e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02216 - - aprc:113868825 288.885